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Submitted SNP(ss) Details: ss2771001942           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_2_26405492
RefSNP(rs#)rs1489162379
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2771001942|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 GCAAGGAGCC AGCATCCCGG TACCA
 Y
 ACTGATAGTT GATCAGAGGC CAGCT

  Submitted Frequency for ss2771001942 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
MALE17100C=0.99994153
T=0.00005848
gnomad-MALEGNOMAD
OTH982C=1.00000000
T=0.00000000
gnomad-OTHGNOMAD
ASJ302C=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
NFE14976C=0.99993324
T=0.00006677
gnomad-NFEGNOMAD
AFR8728C=1.00000000
T=0.00000000
gnomad-AFRGNOMAD
FEMALE13842C=1.00000000
T=0.00000000
gnomad-FEMALEGNOMAD
EAS1622C=1.00000000
T=0.00000000
gnomad-EASGNOMAD
FIN3494C=1.00000000
T=0.00000000
gnomad-FINGNOMAD
AMR838C=1.00000000
T=0.00000000
gnomad-AMRGNOMAD


  dbSNP summary of Genotypes for ss2771001942 back to top
No sufficient data to compute Hardy-weinberg probability for ss2771001942.


  Submitted individual genotype for ss2771001942 back to top
There is no individual genotype data for ss2771001942.

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