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Submitted SNP(ss) Details: ss2778197835           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_2_114378085
RefSNP(rs#)rs1489994431
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleGAA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2778197835|allelePos=26|len=51|taxid=9606|alleles='GAA/-'|mol=Genomic
 CAGTCATGAG ATGTAAATAA ATGAG
 N
 GAAGATTTTT GAGCCACTGA AATTT

  Submitted Frequency for ss2778197835 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR766GAA=1.00000000
-=0.00000000
gnomad-AMRGNOMAD
OTH876GAA=1.00000000
-=0.00000000
gnomad-OTHGNOMAD
NFE13374GAA=0.99992526
-=0.00007477
gnomad-NFEGNOMAD
ASJ218GAA=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
EAS1578GAA=1.00000000
-=0.00000000
gnomad-EASGNOMAD
FIN3404GAA=1.00000000
-=0.00000000
gnomad-FINGNOMAD
FEMALE12872GAA=0.99992234
-=0.00007769
gnomad-FEMALEGNOMAD
AFR8470GAA=0.99988192
-=0.00011806
gnomad-AFRGNOMAD
MALE15814GAA=0.99993676
-=0.00006324
gnomad-MALEGNOMAD


  dbSNP summary of Genotypes for ss2778197835 back to top
No sufficient data to compute Hardy-weinberg probability for ss2778197835.


  Submitted individual genotype for ss2778197835 back to top
There is no individual genotype data for ss2778197835.

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