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Submitted SNP(ss) Details: ss2779548569           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_2_130729868
RefSNP(rs#)rs1489281714
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2779548569|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 TATTTTGTTT TGGAAAATAA ATTTA
 Y
 ATGATCCTGT AAATGTGTAA GATAC

  Submitted Frequency for ss2779548569 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE15012T=0.99993336
C=0.00006661
gnomad-NFEGNOMAD
OTH982T=1.00000000
C=0.00000000
gnomad-OTHGNOMAD
EAS1620T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
AMR838T=1.00000000
C=0.00000000
gnomad-AMRGNOMAD
AFR8732T=1.00000000
C=0.00000000
gnomad-AFRGNOMAD
ASJ302T=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
MALE17116T=1.00000000
C=0.00000000
gnomad-MALEGNOMAD
FIN3490T=1.00000000
C=0.00000000
gnomad-FINGNOMAD
FEMALE13860T=0.99992788
C=0.00007215
gnomad-FEMALEGNOMAD


  dbSNP summary of Genotypes for ss2779548569 back to top
No sufficient data to compute Hardy-weinberg probability for ss2779548569.


  Submitted individual genotype for ss2779548569 back to top
There is no individual genotype data for ss2779548569.

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