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Submitted SNP(ss) Details: ss2785087583           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_2_201779261
RefSNP(rs#)rs1490176290
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2785087583|allelePos=26|len=51|taxid=9606|alleles='G/A/C'|mol=Genomic
 TCACACCTAT AATCTCACCC CTTTG
 V
 GAGACTGAGG TGGGAGGACT GCTTG

  Submitted Frequency for ss2785087583 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13836C=0.00007228
G=0.99992770
A=0.00000000
gnomad-FEMALEGNOMAD
NFE14972G=1.00000000
A=0.00000000
C=0.00000000
gnomad-NFEGNOMAD
OTH982G=1.00000000
A=0.00000000
C=0.00000000
gnomad-OTHGNOMAD
AFR8726C=0.00022920
G=0.99965620
A=0.00011460
gnomad-AFRGNOMAD
EAS1622G=1.00000000
A=0.00000000
C=0.00000000
gnomad-EASGNOMAD
MALE17088G=0.99988294
A=0.00005852
C=0.00005852
gnomad-MALEGNOMAD
ASJ302G=1.00000000
A=0.00000000
C=0.00000000
gnomad-ASJGNOMAD
AMR836G=1.00000000
A=0.00000000
C=0.00000000
gnomad-AMRGNOMAD
FIN3484G=1.00000000
A=0.00000000
C=0.00000000
gnomad-FINGNOMAD


  dbSNP summary of Genotypes for ss2785087583 back to top
No sufficient data to compute Hardy-weinberg probability for ss2785087583.


  Submitted individual genotype for ss2785087583 back to top
There is no individual genotype data for ss2785087583.

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