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Submitted SNP(ss) Details: ss2789236770           
Submitter
HandleGNOMAD
Submitter SNP IDrs226
RefSNP(rs#)rs226
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2789236770|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 CAAGTTCAAA TTTGGCTTCC TTTGT
 Y
 AAATTATACC CAAGCGGGAT TGTGA

  Submitted Frequency for ss2789236770 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
MALE17106T=0.95989710
C=0.04010289
gnomad-MALEGNOMAD
AMR838T=0.98448688
C=0.01551313
gnomad-AMRGNOMAD
NFE15000T=0.96439999
C=0.03560000
gnomad-NFEGNOMAD
FEMALE13836T=0.95786357
C=0.04213646
gnomad-FEMALEGNOMAD
FIN3494T=0.93445909
C=0.06554092
gnomad-FINGNOMAD
AFR8722T=0.95001149
C=0.04998853
gnomad-AFRGNOMAD
OTH980T=0.94387758
C=0.05612245
gnomad-OTHGNOMAD
EAS1606T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
ASJ302T=0.99337751
C=0.00662252
gnomad-ASJGNOMAD


  dbSNP summary of Genotypes for ss2789236770 back to top
No sufficient data to compute Hardy-weinberg probability for ss2789236770.


  Submitted individual genotype for ss2789236770 back to top
There is no individual genotype data for ss2789236770.

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