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Submitted SNP(ss) Details: ss279724009           
Submitter
HandleGMI
Submitter SNP IDGMI_AK_SNP_4044262
RefSNP(rs#)rs254
Submitted Batch ID2009AK_SNP
Submitted DateDec 16, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodDIRECT DNA SEQUENCING
Ascertainment Samplesize2
PopulationAK_Koreans
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss279724009|allelePos=501|len=1001|taxid=9606|alleles='C/G'|mol=Genomic
 CCAGCCATCC TGAGTGGAAA CTGCTGCATA AGGCTAGTTT AAGAGACTCA AATTCATTTT
 AGAAGGAGCC AAGCCTCCTT TTATGTCTCT CTAAGTAAAG ATACCATGAC TGTAGAATAG
 GAGCTAATAA GAATCTAAAT AGCTGCCAGT GCATTCAAAT GATGAGCAGT GACATGCGAA
 TGTCATACGA ATGGAAATTT ACAAATCTGT GTTCCTGCTT TTTTCCCTTT TAAGGCCTCG
 ATCCAGCTGG ACCTAACTTT GAGTATGCAG AAGCCCCGAG TCGTCTTTCT CCTGATGATG
 CAGATTTTGT AGACGTCTTA CACACATTCA CCAGAGGGTC CCCTGGTCGA AGCATTGGAA
 TCCAGAAACC AGTTGGGCAT GTTGACATTT ACCCGAATGG AGGTACTTTT CAGCCAGGAT
 GTAACATTGG AGAAGCTATC CGCGTGATTG CAGAGAGAGG ACTTGGAGGT AAATATTATT
 TAGAAGCGAA TTAAATGTGA
 S
 TCTTATCCTT AACCCTTATT GACCCAATGT CCTACTCAGT AGCTTCAAAG TATGTAGTTT
 TCATATACAC ATTTGGCCAA ATTATGTTTC TGAAGAATTC TGCAATGTTC AGCATGACCA
 CCTTAGAGCC AGGCAGACAG CCATTTTATC TTTTATTTAC TATACTGTAG GCTACACTGA
 GCAGTGCACT TACAGTAGCA AGAGAAAAAG GTGGGATTTT AGACAGGAAG ACTCCACTGA
 CCTCAATAAT GGCATCATAA AATGCTATCT GGCCACATGT TGTCATACCT TGAATGTAGC
 TGCAAAGCCA ATGGAAAGAT TTTAGATGTT ACTGGAACAG AAGATGTTAA TTAGGATAAA
 TCTTCCAAAA TGTTCAGAAC ATAATGTTAG CTTAATGTTT TACTTTAATA ATGTTAGCTT
 GTGTTAAATT TATGATTTTT GTTTGTTTGT TTTTTGAGAT AGAGTCTTAT TCTATTGCCC
 AAGCTGGGGT GCAGTCACAC

  Submitted Frequency for ss279724009 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AB
WEST AFRICA
190C=0.75800002
G=0.24200000
LPL_AB_2KAMBOH


  dbSNP summary of Genotypes for ss279724009 back to top
No sufficient data to compute Hardy-weinberg probability for ss279724009.


  Submitted individual genotype for ss279724009 back to top
There is no individual genotype data for ss279724009.

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