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Submitted SNP(ss) Details: ss2799589272           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_3_136555984
RefSNP(rs#)rs1491234274
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleAA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2799589272|allelePos=26|len=51|taxid=9606|alleles='AA/-'|mol=Genomic
 TACTAGTATG TATCTACACA CACAC
 N
 CACACACACA CACACACACA GAATT

  Submitted Frequency for ss2799589272 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FIN3444AA=1.00000000
-=0.00000000
gnomad-FINGNOMAD
EAS1608AA=1.00000000
-=0.00000000
gnomad-EASGNOMAD
NFE14822AA=1.00000000
-=0.00000000
gnomad-NFEGNOMAD
MALE16900AA=0.99994081
-=0.00005917
gnomad-MALEGNOMAD
FEMALE13666AA=1.00000000
-=0.00000000
gnomad-FEMALEGNOMAD
ASJ300AA=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
AMR830AA=1.00000000
-=0.00000000
gnomad-AMRGNOMAD
OTH972AA=1.00000000
-=0.00000000
gnomad-OTHGNOMAD
AFR8590AA=0.99988359
-=0.00011641
gnomad-AFRGNOMAD


  dbSNP summary of Genotypes for ss2799589272 back to top
No sufficient data to compute Hardy-weinberg probability for ss2799589272.


  Submitted individual genotype for ss2799589272 back to top
There is no individual genotype data for ss2799589272.

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