NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss2804875727           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_4_3587232
RefSNP(rs#)rs1489951967
Submitted Batch IDgenome_batch_chr4
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2804875727|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 TAATACAGCA TCATTTAAAA AGTTA
 Y
 AGTTTCTATT TTTTTTTGTT GCTCA

  Submitted Frequency for ss2804875727 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE15018T=1.00000000
C=0.00000000
gnomad-NFEGNOMAD
ASJ302T=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
MALE17128T=1.00000000
C=0.00000000
gnomad-MALEGNOMAD
FEMALE13862T=0.99985570
C=0.00014428
gnomad-FEMALEGNOMAD
OTH980T=1.00000000
C=0.00000000
gnomad-OTHGNOMAD
AMR838T=1.00000000
C=0.00000000
gnomad-AMRGNOMAD
FIN3494T=1.00000000
C=0.00000000
gnomad-FINGNOMAD
EAS1622T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
AFR8736T=0.99977106
C=0.00022894
gnomad-AFRGNOMAD


  dbSNP summary of Genotypes for ss2804875727 back to top
No sufficient data to compute Hardy-weinberg probability for ss2804875727.


  Submitted individual genotype for ss2804875727 back to top
There is no individual genotype data for ss2804875727.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement