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Submitted SNP(ss) Details: ss2835087622           
Submitter
HandleGNOMAD
Submitter SNP IDrs1040858
RefSNP(rs#)rs1040858
Submitted Batch IDgenome_batch_chr6
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2835087622|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 AGGCATCACG GGTACACCAA GGAAA
 Y
 AGGGAGAAAT CAGAGAGAAC AGAAC

  Submitted Frequency for ss2835087622 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
NFE14992T=0.81610191
C=0.18389808
gnomad-NFEGNOMAD
FEMALE13844T=0.83530772
C=0.16469228
gnomad-FEMALEGNOMAD
FIN3494T=0.83514595
C=0.16485403
gnomad-FINGNOMAD
MALE17104T=0.83442467
C=0.16557531
gnomad-MALEGNOMAD
EAS1622T=0.97287297
C=0.02712700
gnomad-EASGNOMAD
OTH982T=0.83197558
C=0.16802444
gnomad-OTHGNOMAD
AFR8720T=0.84392202
C=0.15607798
gnomad-AFRGNOMAD
AMR836T=0.80502391
C=0.19497608
gnomad-AMRGNOMAD
ASJ302T=0.84768212
C=0.15231788
gnomad-ASJGNOMAD


  dbSNP summary of Genotypes for ss2835087622 back to top
No sufficient data to compute Hardy-weinberg probability for ss2835087622.


  Submitted individual genotype for ss2835087622 back to top
There is no individual genotype data for ss2835087622.

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