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Submitted SNP(ss) Details: ss2837272438           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_6_29732103
RefSNP(rs#)rs1488963965
Submitted Batch IDgenome_batch_chr6
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleAATCTGC/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2837272438|allelePos=26|len=51|taxid=9606|alleles='AATCTGC/-'|mol=Genomic
 GTTTTGTTTG CATGATCTGA AACCA
 N
 AATCTCTCTG AGATATGTCT GTAAT

  Submitted Frequency for ss2837272438 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13852AATCTGC=0.99992782
-=0.00007219
gnomad-FEMALEGNOMAD
EAS1622AATCTGC=1.00000000
-=0.00000000
gnomad-EASGNOMAD
NFE15014AATCTGC=0.99993342
-=0.00006660
gnomad-NFEGNOMAD
MALE17124AATCTGC=1.00000000
-=0.00000000
gnomad-MALEGNOMAD
FIN3490AATCTGC=1.00000000
-=0.00000000
gnomad-FINGNOMAD
ASJ302AATCTGC=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
AMR838AATCTGC=1.00000000
-=0.00000000
gnomad-AMRGNOMAD
AFR8730AATCTGC=1.00000000
-=0.00000000
gnomad-AFRGNOMAD
OTH980AATCTGC=1.00000000
-=0.00000000
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2837272438 back to top
No sufficient data to compute Hardy-weinberg probability for ss2837272438.


  Submitted individual genotype for ss2837272438 back to top
There is no individual genotype data for ss2837272438.

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