NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss2900538149           
Submitter
HandleGNOMAD
Submitter SNP IDrs10792421
RefSNP(rs#)rs10792421
Submitted Batch IDgenome_batch_chr11
Submitted DateMay 22, 2017
Publication CitedN.D.
First entry to dbSNPMay 22 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2900538149|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic
 CTGGCTCAAG ATGCTGTAGC TGGGA
 R
 TTGGAGGTCA AGTAGCAGGG GTCCA

  Submitted Frequency for ss2900538149 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
OTH980A=0.56632656
G=0.43367347
gnomad-OTHGNOMAD
AMR838A=0.74343675
G=0.25656325
gnomad-AMRGNOMAD
AFR8680G=0.79677421
A=0.20322581
gnomad-AFRGNOMAD
EAS1616A=0.91769803
G=0.08230198
gnomad-EASGNOMAD
ASJ302G=0.53973508
A=0.46026489
gnomad-ASJGNOMAD
FIN3488A=0.53469038
G=0.46530962
gnomad-FINGNOMAD
MALE17050G=0.52463341
A=0.47536656
gnomad-MALEGNOMAD
NFE14946A=0.55365986
G=0.44634014
gnomad-NFEGNOMAD
FEMALE13800G=0.52181160
A=0.47818840
gnomad-FEMALEGNOMAD


  dbSNP summary of Genotypes for ss2900538149 back to top
No sufficient data to compute Hardy-weinberg probability for ss2900538149.


  Submitted individual genotype for ss2900538149 back to top
There is no individual genotype data for ss2900538149.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement