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Submitted SNP(ss) Details: ss2948392555           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_17_18965608
RefSNP(rs#)rs1480507997
Submitted Batch IDgenome_batch_chr17
Submitted DateMay 23, 2017
Publication CitedN.D.
First entry to dbSNPMay 23 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2948392555|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 GGTGGCTTTT TAATTTTAGT CTTGG
 Y
 GCGAGGCGGG GGATGCTGTG TGGCA

  Submitted Frequency for ss2948392555 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR694C=1.00000000
T=0.00000000
gnomad-AMRGNOMAD
AFR8234C=0.99987853
T=0.00012145
gnomad-AFRGNOMAD
MALE11898C=0.99991596
T=0.00008405
gnomad-MALEGNOMAD
EAS1366C=0.99926794
T=0.00073206
gnomad-EASGNOMAD
NFE8052C=1.00000000
T=0.00000000
gnomad-NFEGNOMAD
ASJ176C=1.00000000
T=0.00000000
gnomad-ASJGNOMAD
FEMALE9326C=0.99989277
T=0.00010723
gnomad-FEMALEGNOMAD
FIN2114C=1.00000000
T=0.00000000
gnomad-FINGNOMAD
OTH588C=1.00000000
T=0.00000000
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2948392555 back to top
No sufficient data to compute Hardy-weinberg probability for ss2948392555.


  Submitted individual genotype for ss2948392555 back to top
There is no individual genotype data for ss2948392555.

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