NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3003192038           
Submitter
HandleSWEGEN
Submitter SNP IDNC_000008.10:54839762_54839765del
RefSNP(rs#)rs745753472
Submitted Batch IDSWEGEN
Submitted DateMay 30, 2017
Publication CitedN.D.
First entry to dbSNPMay 30 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA_WGS
Ascertainment Samplesize2000
PopulationSWEGEN
Allele
Observed AlleleTTTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3003192038|allelePos=26|len=51|taxid=9606|alleles='TTTT/-'|mol=Genomic
 GATGCTCTTT TTGTTTTTTG GGGCG
 N
 TTTTTTTTTT TTTGAGACAA GGTCT

  Submitted Frequency for ss3003192038 back to top
There is no frequency submission for ss3003192038.


  dbSNP summary of Genotypes for ss3003192038 back to top
No sufficient data to compute Hardy-weinberg probability for ss3003192038.


  Submitted individual genotype for ss3003192038 back to top
There is no individual genotype data for ss3003192038.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement