NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3029682327           
Submitter
HandleKOEX
Submitter SNP IDchr11:g.57177563C>T
RefSNP(rs#)rs1472040914
Submitted Batch IDKOEX_Exome_SNP_Discovery
Submitted DateJul 28, 2017
Publication Cited28706299
First entry to dbSNPJul 28 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWHOLE EXOME SEQUENCING
Ascertainment Samplesize2606
PopulationKOEX_KOR
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3029682327|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 ATGTCAGGGC CAGCGAAGGC ACCGT
 Y
 GAGCAGAGGG CCACCGCCAA AGTGG

  Submitted Frequency for ss3029682327 back to top
There is no frequency submission for ss3029682327.


  dbSNP summary of Genotypes for ss3029682327 back to top
No sufficient data to compute Hardy-weinberg probability for ss3029682327.


  Submitted individual genotype for ss3029682327 back to top
There is no individual genotype data for ss3029682327.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement