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Submitted SNP(ss) Details: ss333034323           
Submitter
Handle1000GENOMES
Submitter SNP ID20100804_snps_4677859_chr6_1611085
RefSNP(rs#)rs2230096
Submitted Batch IDphase_1_vqsr_v2b_sites_june_2011
Submitted DateJul 20, 2011
Publication CitedN.D.
First entry to dbSNPMar 22 2011 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodLOW_COVERAGE
Ascertainment Samplesize1258
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginT:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:1403

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss333034323|allelePos=51|len=101|taxid=9606|alleles='C/T'|mol=Genomic
 AAGCAGGGCT GGCAGAACAG CATCCGCCAC AACCTCTCGC TCAACGAGTG
 Y
 TTCGTCAAGG TGCCGCGCGA CGACAAGAAG CCGGGCAAGG GCAGCTACTG

  Submitted Frequency for ss333034323 back to top
There is no frequency submission for ss333034323.


  dbSNP summary of Genotypes for ss333034323 back to top
No sufficient data to compute Hardy-weinberg probability for ss333034323.


  Submitted individual genotype for ss333034323 back to top
There is no individual genotype data for ss333034323.

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