NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3787305791           
Submitter
HandlePACBIO
Submitter SNP IDGATKHC.4013727
RefSNP(rs#)clustering in process
Submitted Batch IDGATKHC
Submitted DateMar 29, 2019
Publication Cited[1] Highly-accurate long-read sequencing improves variant detection and assembly of a human genome
First entry to dbSNPMar 29 2019 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSRX5327410
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed Allele-/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3787305791|allelePos=26|len=51|taxid=9606|alleles='-/A'|mol=Genomic
 GGCAACAAGA GCAAAACTCT GTCTC
 N
 AAAAAAAAAA AAAAAATTAA AGAAA

  Submitted Frequency for ss3787305791 back to top
There is no frequency submission for ss3787305791.


  dbSNP summary of Genotypes for ss3787305791 back to top
No sufficient data to compute Hardy-weinberg probability for ss3787305791.


  Submitted individual genotype for ss3787305791 back to top
There is no individual genotype data for ss3787305791.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement