NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3978838781           
Submitter
HandleKOGIC
Submitter SNP IDchr17:g.42186821_3
RefSNP(rs#)clustering in process
Submitted Batch IDKorea1K
Submitted DateMar 02, 2020
Publication Cited[1] Korean Genome Project: 1,094 Korean personal genomes with clinical information
First entry to dbSNPMar 2 2020 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodKOGIC_WGS
Ascertainment Samplesize1832
PopulationKorea1K_Korean
Allele
Observed AlleleTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3978838781|allelePos=26|len=51|taxid=9606|alleles='TT/-'|mol=Genomic
 TTTTCTTTTC TTTTTCTTTT CTTTC
 N
 TTTTTTTTTT TTTTTTGAGA CAGTC

  Submitted Frequency for ss3978838781 back to top
There is no frequency submission for ss3978838781.


  dbSNP summary of Genotypes for ss3978838781 back to top
No sufficient data to compute Hardy-weinberg probability for ss3978838781.


  Submitted individual genotype for ss3978838781 back to top
There is no individual genotype data for ss3978838781.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement