NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss42445822           
Submitter
HandleABI
Submitter SNP IDhCV26234509
RefSNP(rs#)rs34424574
Submitted Batch IDxplore_hum_chr5_2
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPJul 18 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss42445822|allelePos=301|len=601|taxid=9606|alleles='-/T'|mol=Genomic
 ACTTCCCAGG CTGGGAGGAC TGCCAATAAA CAACACAGGA TGTGAGGGAG GTAGGAGAAG
 GTGGCCTCTG TGAATAGAGC AGGTTGAGTA GCCTCTTTAG CTCCTCACTT AAAGCTAGAG
 GTGACAGTTC TAGATTCTTG AGTCCAGGGG TATGAAGCCT GCAGTTTAAG GTCTCAGAAG
 ATCCTAGAAC TTCTGCAACT CACTGATTCT CCTCTGTGGT GAAGTTTTTC TTATTCCAGA
 GCCTTTCTAC CTCCTTCTAC AACCAAGTCT TTGTCCACTT CCATCCACTT TGAGCACTTT
 N
 TTTTTTTTTT TTTTTTTTGC TTTGAGACAG AGTCTTGCTT TGTTGTCCAG GCTGGGGTGC
 GGTAACACAA TCATGGCTCA CTGCAACCTT GACCTCATGG GCGGACCGGA TCCTCCCATC
 TCAGCCTCTC GAGTAGCTGG GACCACAGGC ATGTACCACC ATGCCTGGCT CATATGTTTT
 TTTAAAGCCT GGTCTCACCA TGTTGCCTGG GCTCAAGCCA TCCTCTGCCT TGGCCTTGTA
 AAGTGTTGGG ATTACAGGCA TGAACTGCCT CACTTGGTCT TCTGGGCACC TCTTTAAGTT

  Submitted Frequency for ss42445822 back to top
There is no frequency submission for ss42445822.


  dbSNP summary of Genotypes for ss42445822 back to top
No sufficient data to compute Hardy-weinberg probability for ss42445822.


  Submitted individual genotype for ss42445822 back to top
There is no individual genotype data for ss42445822.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement