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Submitted SNP(ss) Details: ss48417375           
Submitter
HandleAPPLERA_GI
Submitter SNP IDhCV7579099
RefSNP(rs#)rs942379
Submitted Batch ID1-1
Submitted DateNov 30, 2005
Publication Cited[1] Natural Selection on Protein Coding Genes in the Human Genome
First entry to dbSNPSep 28 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodAGI_ASP PIPELINE
Ascertainment Samplesize78
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss48417375|allelePos=301|len=601|taxid=9606|alleles='G/A'|mol=Genomic
 AGCAGGTTGG CATTTATGCA TGGAATCATT ATCCCAAGAC ACCTATGCAG CTGTGTGGTT
 TCAGTTTCAA AGACAGCAAT CACTATTTAG TTCTTTGCTT GAGAATGAAC CAGGCTTTAG
 GTCACCAAAG AAATGATTCT ATATTTTTCT TTAGCAGGTT CATCTTAATG ACAAATTACC
 CAAAATTTAA CTTTATTTTT CAGTCTTTGA ATACATGCTA TCACCTTTAT AAGTGGATTT
 AGCAGAGCAT CTTTGGAGTC CTTCATGACA AAAAAATTGT ACCTGACTAA GAAGAAATCC
 R
 CTGACAGTGG GTACAATGAC AGGTGCTATG CTCGAAAATC CTCTTGATGC TCCCATGAGA
 AAACTGGAAT ACCTGTGGGT GACAGGAATG TTCCGGTCTA GATCCAGAGA TGTTTGACAG
 TATCCTTCAG CCCTGATCCA TGTATGAATC TATAACTCAA TTATATTTCA CAATTATATA
 TAATTATAAT TAGACAATTA TATCAAAAAG GACTTGCACT ATGTATATTC AATGAGAGGG
 ATGAGGACAA ATCAATACCC CTTCCTCAAC ATACCTGAAA AAAACGGCCA CAGGTCTATC

  Submitted Frequency for ss48417375 back to top
There is no frequency submission for ss48417375.


  dbSNP summary of Genotypes for ss48417375 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
AGI_ASP population
- NORTH AMERICA 		7878G=0.66666669
A=0.33333334G/G=0.46153846
A/G=0.41025642
A/A=0.12820514
Pr(chiSq=0.231,df=1)
=0.655		Genotype
Freq.

  Submitted individual genotype for ss48417375 back to top
There is no individual genotype data for ss48417375.

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