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Submitted SNP(ss) Details: ss48420139           
Submitter
HandleAPPLERA_GI
Submitter SNP IDhCV901792
RefSNP(rs#)rs328
Submitted Batch ID1-1
Submitted DateNov 30, 2005
Publication Cited[1] Natural Selection on Protein Coding Genes in the Human Genome
First entry to dbSNPSep 28 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodAGI_ASP PIPELINE
Ascertainment Samplesize72
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginG:Germline C:Germline
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss48420139|allelePos=301|len=601|taxid=9606|alleles='G/C'|mol=Genomic
 GAGAAGTGAA GATTCAGGGG TAGTTCAAGG AGTAAAATAA AACCTAAAAT GTGTGCCTGG
 GTTGAAGGTC CGGGCTGGGA GAAACAAGAG GAGAAAGAAA AAAAGAGGAA GTATTGCATA
 AAGCAACAGA CCCATTTGAT ACATATGCAG AAGGACTAAG AAAGACTGAT TGAATGCTTT
 GATCACATGA GTCAGGGCAA GCTGCTGGTG ATGGGGTGAA GAGGAATGCA TGAAGCTGCC
 TCCCTTAGGG TGCAAGCTCA GGATGCCCAG TCAGCTTTAG CCCAGAATGC TCACCAGCCT
 S
 ACTTCTTATT CAGAGACTTG TCATGGCATT TCACAAATAC CGCAGGTGCC TTTCCTTTCT
 GCAAATGAGA CACTTTCTCC CTAGAACAGA AGATCACCCT GTGGAAGAAA ATGGATGTGA
 ATATGCCATG TAGAACAATC AAAAGCACTG TTCACAAAGG TACAGTTCTG TCAGGACTGT
 TTAAATACTA CATGATCATG CTGGGTAATT GTTTTGATAT TCCCAATAAT TAACTGTCAC
 ACTCAGGCCA CATCAGAATC AGAGGGTAAT TTGAGAGCCT AACCCGGTGT TCAGCAACCA

  Submitted Frequency for ss48420139 back to top
There is no frequency submission for ss48420139.


  dbSNP summary of Genotypes for ss48420139 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
AGI_ASP population
- NORTH AMERICA 		7070G=0.95714283
C=0.04285714G/G=0.91428572
C/G=0.08571429
Pr(chiSq=0.006,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss48420139 back to top
There is no individual genotype data for ss48420139.

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