NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss490960916           
Submitter
Handle1000GENOMES
Submitter SNP ID20110521_exome_468714_chr8_19811897
RefSNP(rs#)rs254
Submitted Batch IDphase_1_exome_sites_20110521
Submitted DateFeb 10, 2012
Publication CitedN.D.
First entry to dbSNPFeb 10 2012 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodEXOME_CAPTURE
Ascertainment Samplesize2256
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss490960916|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 CAGATTTTGT AGACGTCTTA CACACATTCA CCAGAGGGTC CCCTGGTCGA AGCATTGGAA
 TCCAGAAACC AGTTGGGCAT GTTGACATTT ACCCGAATGG AGGTACTTTT CAGCCAGGAT
 GTAACATTGG AGAAGCTATC CGCGTGATTG CAGAGAGAGG ACTTGGAGGT AAATATTATT
 TAGAAGCGAA TTAAATGTGA
 S
 TCTTATCCTT AACCCTTATT GACCCAATGT CCTACTCAGT AGCTTCAAAG TATGTAGTTT
 TCATATACAC ATTTGGCCAA ATTATGTTTC TGAAGAATTC TGCAATGTTC AGCATGACCA
 CCTTAGAGCC AGGCAGACAG CCATTTTATC TTTTATTTAC TATACTGTAG GCTACACTGA
 GCAGTGCACT TACAGTAGCA

  Submitted Frequency for ss490960916 back to top
There is no frequency submission for ss490960916.


  dbSNP summary of Genotypes for ss490960916 back to top
No sufficient data to compute Hardy-weinberg probability for ss490960916.


  Submitted individual genotype for ss490960916 back to top
There is no individual genotype data for ss490960916.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement