Submitted SNP(ss) Details: ss6155919

Submitted SNP(ss) Details: ss6155919

Submitter
Handle	SC_JCM
Submitter SNP ID	NT_006307.11_53046
RefSNP(rs#)	rs4555615
Submitted Batch ID	02-JAN-2003
Submitted Date	Jan 10, 2003
Publication Cited	[1] SNPs detected by comparing TSC reads to NCBI build 30 Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNP	Jan 10 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_006307.11
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	SNPS_DETECTED_BY_GENOMIC_ALIGNMENT_OF_TSC_READS
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	G/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	nonCpG

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
SEQUENCE:JBQ35B04.B1POSITION:-103QUALITY:31

Fasta sequence (Legend)

 taatttttgt atttttagta gagacggggt ttcaccatgt tggccaggct ggtctcgaac
 tcctgacctc aaatgatccg cctgcctcga cctcccaaag ttctgggatt acaggcgtga
 gccaccgcgc ccggccGACC TGCTAAGTTT TAATCAAGTA CTCTGCACTA TGCAACAAAC
 ATTAGGAAGT AATAGAAAAA
 R
 ATTAATCTAA AAACCCTCTG GAGAGTCAAA GAATTGCAGA TTTAAAATAG CATGAATACT
 TGGATTCATG GTATTGAAAA AGGAGCTCGC ATTTACCCGC ATGCACAAAC TGCGCCTGCC
 CACCTCTATC AGAGCATTTT TCAAGCTGTG CTACAGTTAA CCATGTATTA CCCAAAGCCA
 ATCTGTCCTG GCAGATCATA

Submitted Frequency for ss6155919

There is no frequency submission for ss6155919.

dbSNP summary of Genotypes for ss6155919

No sufficient data to compute Hardy-weinberg probability for ss6155919.

Submitted individual genotype for ss6155919

There is no individual genotype data for ss6155919.

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