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Submitted SNP(ss) Details: ss6477           
Submitter
HandleARAVINDA
Submitter SNP IDCHAK00087
RefSNP(rs#)rs5036
Submitted Batch IDMKH001-Genomic
Submitted DateJun 29, 1999
Publication Cited10391210
First entry to dbSNPJun 29 1999 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodChip_Assay
Ascertainment Samplesize148
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginG:Germline A:Germline
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
In Expressed SequenceY
Variation
Frequency Submissionpopulation count: 2
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
CERTAIN by Affymetrix Ulysses Version 1.0

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6477|allelePos=61|len=121|taxid=9606|alleles='A/G'|mol=Genomic
 GCTCACGACA CCGAGGCAAC AGCCACAGAC TACCACACCA CATCACACCC GGGTACCCAC
 R
 AGGTGAGGAC CCCAGCCTCC TCCGTTCTTT CCCATGCTGC CTTTGGGACC CACCATTTGA

  Submitted Frequency for ss6477 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
HYP1
MULTI-NATIONAL
80A=0.75000000
G=0.25000000
0.375 +/-0.068MKH001ARAVINDA
CEPH
MULTI-NATIONAL
184A=1.00000000
G=0.00000000
1_2004SEQUENOM


  dbSNP summary of Genotypes for ss6477 back to top
No sufficient data to compute Hardy-weinberg probability for ss6477.


  Submitted individual genotype for ss6477 back to top
There is no individual genotype data for ss6477.

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