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Submitted SNP(ss) Details: ss6567952           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_009609.13_1078951
RefSNP(rs#)rs3741721
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P82464FH2.T0position:178quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6567952|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 ACCTATATAA GGTGAAGGTT ATGAATGACA TCTGAGGTCC CTTCTTGCAA TGACATCTTA
 TTATTTTTTC CCCTCCCCAA CACATTCAGG CTGTGAGGTT CTTCCTGCGA GCTAACCTCA
 GTCTGTCTTG CTGCATGACC AACCTATCCT CTTTACTGGG GGAATTATTG GAAACACTCC
 TCCCAAAGTC TCTGCATATA
 Y
 TCATAGTCAA GAAGTCCTTT GTCCCCAGTC TACATTTTCC TTTTCAGGGC TCAAGATACT
 TACAGACATT CACAGCTTCA ACACCTTCAC ACAGCCTGAG TGGGGAAAAA GTAAGGAAGG
 GGAAGATAAA AGAAGTCAGA ATGAGGTCAT CGAATTTCCG CTAGGTGCTG AAATGGGTCA
 TCTCAGGGCT ATTTCTGACC

  Submitted Frequency for ss6567952 back to top
There is no frequency submission for ss6567952.


  dbSNP summary of Genotypes for ss6567952 back to top
No sufficient data to compute Hardy-weinberg probability for ss6567952.


  Submitted individual genotype for ss6567952 back to top
There is no individual genotype data for ss6567952.

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