Submitter Handle PERLEGEN Submitter SNP ID PGP01473229 RefSNP(rs#) rs3818276 Submitted Batch ID PGP_29-JAN-2007 Submitted Date Jan 30, 2007 Publication Cited N.D. First entry to dbSNP Jan 30 2007 12:00:00:000AM Resource Links GenBank Accession NC_000006.9 Submitted Gene Name N.D Submitted Gene ID N.D. Submitted SNP Synonyms N.D Submitted linkout N.D Assay Species Homo sapiens Molecular Type Genomic Method PERLEGEN-600K Ascertainment Samplesize 1 Population N.D. Allele Observed Allele A/G Ancestral Allele N.D. Allele Origin N/A SNP Class SNV CpG Code N.D. Validation Validation Status HWE Goodness of Fit not applicable Variation Frequency Submission N.D. Genotype Summary population count: 4 Genotype Submission N.D. Haplotype N.D.   Fasta sequence   (Legend) >gnl|dbSNP|ss68962601|allelePos=65|len=129|taxid=9606|alleles='A/G'|mol=Genomic GGATCCACTG AGCCCGGAGA GAGCAACTCC GCAATTTTAC CTGAGCGGAA GAATTCAAGA CCGC R TTAGATAGGG GCGG CTGCGGATCC CCGACACATC AGGAATCGGC TGGGGCCTTC TCCTTCAGCA   Submitted Frequency for ss68962601 There is no frequency submission for ss68962601.   dbSNP summary of Genotypes for ss68962601 Population ID  -Class Total Sample (2N) Founder (2N) Major Allele Freq. Minor Allele Freq. Genotype Freq. HWE Goodness of Fit Data Source HapMap-CEU 120 120 G=0.80833334 A=0.19166666 G/G=0.66666669 A/G=0.28333333 A/A=0.05000000 Pr(chiSq=0.440,df=1) =0.527 Genotype Freq. HapMap-HCB - EAST ASIA 90 90 G=0.94444442 A=0.05555556 G/G=0.88888890 A/G=0.11111111 Pr(chiSq=0.017,df=1) =1.000 Genotype Freq. HapMap-JPT 90 90 G=0.98888886 A=0.01111111 G/G=0.97777778 A/G=0.02222222 Pr(chiSq=0.000,df=1) =1.000 Genotype Freq. HapMap-YRI 120 120 G=0.86666667 A=0.13333334 G/G=0.75000000 A/G=0.23333333 A/A=0.01666667 Pr(chiSq=0.006,df=1) =1.000 Genotype Freq.   Submitted individual genotype for ss68962601 There is no individual genotype data for ss68962601.

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