Submitter Handle PERLEGEN Submitter SNP ID PGP01879961 RefSNP(rs#) rs328 Submitted Batch ID PGP_29-JAN-2007 Submitted Date Jan 30, 2007 Publication Cited N.D. First entry to dbSNP Jan 30 2007 12:00:00:000AM Resource Links GenBank Accession NC_000008.9 Submitted Gene Name N.D Submitted Gene ID N.D. Submitted SNP Synonyms N.D Submitted linkout N.D Assay Species Homo sapiens Molecular Type Genomic Method PERLEGEN-600K Ascertainment Samplesize 1 Population N.D. Allele Observed Allele C/G Ancestral Allele N.D. Allele Origin G:Germline C:Germline SNP Class SNV CpG Code N.D. Validation Validation Status HWE Goodness of Fit not applicable Variation Frequency Submission N.D. Genotype Summary population count: 4 Genotype Submission N.D. Haplotype N.D.   Fasta sequence   (Legend) >gnl|dbSNP|ss69043156|allelePos=65|len=129|taxid=9606|alleles='C/G'|mol=Genomic TTGCAGAAAG GAAAGGCACC TGCGGTATTT GTGAAATGCC ATGACAAGTC TCTGAATAAG AAGT S AGGCTGGTGA GCAT TCTGGGCTAA AGCTGACTGG GCATCCTGAG CTTGCACCCT AAGGGAGGCA   Submitted Frequency for ss69043156 There is no frequency submission for ss69043156.   dbSNP summary of Genotypes for ss69043156 Population ID  -Class Total Sample (2N) Founder (2N) Major Allele Freq. Minor Allele Freq. Genotype Freq. HWE Goodness of Fit Data Source HapMap-CEU 120 120 C=0.87500000 G=0.12500000 C/C=0.76666665 C/G=0.21666667 G/G=0.01666667 Pr(chiSq=0.005,df=1) =1.000 Genotype Freq. HapMap-HCB - EAST ASIA 90 90 C=0.91111112 G=0.08888889 C/C=0.82222223 C/G=0.17777778 Pr(chiSq=0.073,df=1) =1.000 Genotype Freq. HapMap-JPT 90 90 C=0.85555553 G=0.14444445 C/C=0.73333335 C/G=0.24444444 G/G=0.02222222 Pr(chiSq=0.005,df=1) =1.000 Genotype Freq. HapMap-YRI 120 120 C=0.96666664 G=0.03333334 C/C=0.93333334 C/G=0.06666667 Pr(chiSq=0.005,df=1) =1.000 Genotype Freq.   Submitted individual genotype for ss69043156 There is no individual genotype data for ss69043156.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement