NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss77858195           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr4_89482100-89482103_1
RefSNP(rs#)rs35207771
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/AA
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize103902056 344-345 68 reverse -2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77858195|allelePos=482|len=690|taxid=9606|alleles='-/AA'|mol=Genomic
 TTTGCTTTTG TAAACTGTTA ATGACAAGTG GATTCTAGTA GCTGAATTCA ATGATCCAGG
 GCCCCAGCAA ACTGACAGTC ATGGCTGGTT TCCATAGTTA ACAACATGTA GAACTATTTC
 TTCAAAGAGG TTTAATTAGA ATGTTCGAAT ATTGGAGCTT AAATATAACT GGAGAGCTTT
 GCCTAAGAAA CTTAAACTCA GGCCAGGCGC GGTGGCTCAT GCCTTTAATC CCCGCAGTTT
 GGGTCACCTG AGGCCACGAG TTCGAGACTA GCCTGGCCAA CATGGGGAAA CCCTGTCCCT
 ACTAAAAATA CAAAAATTAG CTGGGCGTGG TGGTGGGCGC CTGTAATCCC AGCTACTTGG
 GAGGCTGAGG CAGGAGAATC GCTTGAACCC AGGAGGCAGA GGTTGCAGTG AGCTGAGATC
 GTGCCATTGC ACTCCAGCCT GGGTGACAAC AGCGAAACTC AGTTTCAAAA AAAAAAAAAA
 A
 N
 GAAAGAAACT TAAACTCATG TTTAAGACTT TCCTTAAACA TGAGAAGGCA AAAGGCAACT
 ACATTTTTCT GATATTATCG GAATAAAATT ATTCCAGTGG CACAATATTT TTTTTTTACA
 GATTACCCTG AAATACTTAC TCTCTACTTT TGTACCAGAA AATCTTAAAG CCACAGCTGG
 ACCAAAGGTA TGCCAGCTCC AAACTTTA

  Submitted Frequency for ss77858195 back to top
There is no frequency submission for ss77858195.


  dbSNP summary of Genotypes for ss77858195 back to top
No sufficient data to compute Hardy-weinberg probability for ss77858195.


  Submitted individual genotype for ss77858195 back to top
There is no individual genotype data for ss77858195.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement