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Submitted SNP(ss) Details: ss77943384           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr19_60175195-60175196_2
RefSNP(rs#)rs55962407
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize105447056 180-183 43 forward 2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77943384|allelePos=501|len=1001|taxid=9606|alleles='TT/-'|mol=Genomic
 AACTGGTGTG AGATGATATC TCATAGTGGT TTTGATTTGC ATTTCTCTGA TGGCCAGTGA
 TGATGAGCAT TTTTTCATGT GTTTTTTGGC TGCATAAATG TCTTCTTTTG AGAAGTGTCT
 GTTCATGTCG TTCGCCCACT TTTTGATGGG GTTGTTTGTT TTTTTCTTGT AAATTATTTT
 CTACCTATTT CTATCGCTTT CAGGTATCGT ACAGTTGGCC TAACATATCT GTGGATTTAA
 CCAATCCTAG ATCAAAAATA ATGGGGGCAA AGACAATTAA AAATAACAAT ACAATAAAAT
 GCACATGAAC TATGGTTATT TAACTCTTCT TGAGAGAGGA TCTCACTCTG TCACCCAGGC
 TGGAATTTAG CAGCACGATC TCGGCTCACT GCAACCTCCG CCTCCCGGGT TCAAGCGATT
 CTCCTGCCTC AGCCTCCCGA GTAGCCGGGA TTACAAGCAT GTCCCACCAT GCCTGGCTGA
 TTTTTTTTTT TTTTTTTTTT
 N
 GTATTCTAAA TAGAGATGGG GTTTCACCAT GTTAGCCAGG ATAGTCTCGA TGTCGTGACC
 TCATGATCTG CCCGCCTCGG CCTCCCAAAG TGTTGGGATT ACAGGCGTGA GCCACCGCAC
 CCAGCCAGCA AGTGCATTTA GAACTACTCT ACTTTCTACC CCATAACTTT TTTTTTTGTT
 TGTTTGAGAC AAGTCTCACT CTGTCACCCA GGATGGAGTG CAGCAGCACA ATCTCAGCTT
 ATTGCAACTC CCGCCCCCTG GGTTCAAGTG TTTCTCCTGC ATCAGCCTCT TGAATAGCTA
 GGATTATACA GGCACCTGCC ACTGTGCCTG GCTAAATTTT GTATTTTAAT AGAGATGGGG
 TTTCACTATG TTGGCCAGGC TGGTCTTGAA CTCCTGACCA CGTGATCAAC CCGCCTCAGC
 CTCCCAATGT GCTGGAATTA CAGGTGTGAG CCGCCATGCC CAGCTACACT TTTTTTTGAA
 ACGGGGTCTC GTTTTCTTGC

  Submitted Frequency for ss77943384 back to top
There is no frequency submission for ss77943384.


  dbSNP summary of Genotypes for ss77943384 back to top
No sufficient data to compute Hardy-weinberg probability for ss77943384.


  Submitted individual genotype for ss77943384 back to top
There is no individual genotype data for ss77943384.

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