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Submitted SNP(ss) Details: ss77951777           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr15_78004535-78004536_1
RefSNP(rs#)rs55852815
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleTTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize105567179 146-150 43 reverse 3

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77951777|allelePos=221|len=699|taxid=9606|alleles='TTT/-'|mol=Genomic
 GCAGCAAATC CAAACAAAAT TTAAGTGCTT TGTTTTGATC ACATTCATTG GGCTTCAGAT
 GTCAATTGTG CGCTGCTTTG GCTTGTGTTT GCAGCCACAA ACACAAGTGG AGTTATTAAC
 GCCACTCACT AAACACAAGT GGAAGTTATT AAGAGTGGAG GTTCCCTCCT CCACTCTTAA
 TAACAGTGAT CCAGTTCGTG TTTTTTTTTT TTTTTTTTTT
 N
 AGACGGAGTC TCGCTCTTTC GCCCAGGCTG GAGTGCAGTG GCATGATCTC GGCTCACTGC
 AAGCTCCGCC TCCCGAGGTC ACGCCATTCT CCTGCCTCAG CCTCCTGCCT AGCTGGGACA
 ACAGGCGCCC GCCACCGCGC CCGGCTAATT TTTTGTATTT AGTAGAGACG GGGTTTCACC
 GTGTTAGCCA GGATGGTCTA GATCTCCTGA CTTCGTGATC CGCCCGCTTC GGCCTCCCAA
 AGTGCTGGGA TTACAGGGGT GAGCCACCGC GCCTGGCCAG TGATCCAGTT CTATTACACC
 TGGGTGTGGA CTCATGCCAC GACTGATTTG CTTCTACCCT TTAGCTTTTC TAGTGCCTTA
 GTTTCCTTGC CTAGAATATC CTGCCTGCCA TAGCTGATTC GTTTTCTTAA AACCCGTACT
 CGCTCATTCA TTCAGGAAAC CTCTTCCTGA AAATTCCACA AAAATCTAAT TATTCTTT

  Submitted Frequency for ss77951777 back to top
There is no frequency submission for ss77951777.


  dbSNP summary of Genotypes for ss77951777 back to top
No sufficient data to compute Hardy-weinberg probability for ss77951777.


  Submitted individual genotype for ss77951777 back to top
There is no individual genotype data for ss77951777.

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