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Submitted SNP(ss) Details: ss77981196           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr2_99218137-99218141_1
RefSNP(rs#)rs10605521
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/TTT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize106400554 404-405 62 reverse -3

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77981196|allelePos=224|len=724|taxid=9606|alleles='-/TTT'|mol=Genomic
 CCACCTAGAC GGTACTGAAG ATTATTTGGA AAGAATATAA GGAAATGATC ATTTTAAGGC
 CAAAAGAGGG TGAAAAGATT TTCCTTTTTT TTCCTATCAA GAACTGTTGA CTTTCTCCCC
 TAACCTGAGA AAGTAAAAAT TTCCTTCCCT CTGTGGAAAC CCAAGGGGTA GTGAGTGTCC
 CACCCTGCCC CAACTAAACC TTTTTTTTTT TTTTTTTTTT TTT
 N
 GAGACAGAGT CTCACTCTGT CGCCCAGGCT GGAGTGCAGT GGCACGATCT CGGCTCACTG
 CAACCTCCGC CTCCCGGGTT CATGCCATTC TCCTGCCTCA GCCTCCCAAG TAGCTAGGAC
 TACAGGCGCC CACTACTACG CCCAGCTTTT TTTTTGTTTG TTTTTTGTTT TTTGTATTTT
 TAGTAGAGAC AGGGTTTCAC TGTGTTAGCC AGGATGGTCT TGATCTCCTG ACCTCATGAT
 CCACCCGCCT CAGCCTCCCA AAGTGCTGGG ATTACAGGTG TGAGCCACTG CGCCCAGACT
 TTTTTTTTTT TTCCTTTTTT TTAAGACAGA GTCTCACTCT GTTGCCCTGT ACCCAGGCTG
 GAGTGCGTTG GCATGATCTC AGCTCACTGC ACCCTCCACC TTTCAGGTTG AAGCAGTTCT
 CCTGCCTTAG CCCCTTGAGT AGCTGGGACC ACAGGTATGT GCCACCATGC CCAGCTAATT
 TTTGTATGTT TTTGTAGAGA

  Submitted Frequency for ss77981196 back to top
There is no frequency submission for ss77981196.


  dbSNP summary of Genotypes for ss77981196 back to top
No sufficient data to compute Hardy-weinberg probability for ss77981196.


  Submitted individual genotype for ss77981196 back to top
There is no individual genotype data for ss77981196.

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