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Submitted SNP(ss) Details: ss80213433           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chr2_113215772-113215776_1
RefSNP(rs#)rs536515501
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/TTT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize65438979 174-175 37 reverse -3

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80213433|allelePos=397|len=710|taxid=9606|alleles='-/TTT'|mol=Genomic
 GAGGTCAATA GGGTGCAACA AAGGCATGGA TTCCTGTCTT CTCTTTTTAT TCCTTTTAAA
 ACACTACCAT GTTTTAACCA AATAACTGAA TTGTAGCCTC ATTCTCAAAG AATCTACTAT
 TATCTATTTT ATGTCCTTCT TACCACATGT AGTGGGTTAC TTAGCTACAT GACTTGATTG
 TTCCCCAGTT AAATCTACTC TTTTTTTTTG AGATGGAGTT TCGCTCTTGT TGTCCAGGCT
 GGAGTGCAGT GGCGTGATCT TCATTCACTC CAAATTCCAC TTTCTGGGTT CAAACGATTC
 TCCTGCCTCA GCCTCCTGAG TATCTGGGAT TACAAGCACG CACCACCACA ACTGGCTAAT
 TTTTCTTTTC TGTTTTTTTT TTTTTTTTTT TTTTTT
 N
 AAAGACAAGA CAGGGTTTCA CCACGTTGGT CAGGCTGGTC TCAAACTCCT GACCTCAGGT
 GATCCACCTG CCTTGGCCTC CCAAAGTGCC GGGATTACAG GCGTGAGCTA CCGTATGCAG
 CCTAAATCTA CTATTAAAGG AAAAAGATTT GTCACCTTTT AAGATAACAA GAAGAATCCA
 ATTTATTTTC TAAAGATAGC TTGTTTTTTC TTTCCATTCA TATAACAAGT ATCGTAAGCA
 ATTATAATGT CACTCGTGTT TGGCACAATA TATGTCTCAT AGAAGAGTCT TCTAAAGGTT
 ATGACCACTG ACA

  Submitted Frequency for ss80213433 back to top
There is no frequency submission for ss80213433.


  dbSNP summary of Genotypes for ss80213433 back to top
No sufficient data to compute Hardy-weinberg probability for ss80213433.


  Submitted individual genotype for ss80213433 back to top
There is no individual genotype data for ss80213433.

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