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Submitted SNP(ss) Details: ss80304474           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chr2_99558014-99558015_1
RefSNP(rs#)rs57090260
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleAA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize66480191 539-542 48 forward 2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80304474|allelePos=501|len=701|taxid=9606|alleles='AA/-'|mol=Genomic
 ATGCCTTACC TAACTCTGGG TAGCAGGTGC CCAAATTACA CTACAGCTAT AAAATAGGAT
 ATGCTGCCTT ACTTCTCTTC CCAGGACTCT TAAGAGAATT AAATGAGAAA AAAGTTAGGT
 AAAAGCACTC TTTAAGATAT AAAACGTTGT GTTTGCTTCG GCTGCACATA CACTAAAATT
 GGAATGACAC AGAGAAGATT ATCATGAGAA AAAATTCTGT ATTAAAAAAT TTACACTTTG
 GGAGGCCGAG GCAGGCGGGA TCACCTGAGG TCAGGAGTTC GAGACCAGCC TGGCCAACAT
 GGTGAAACCC CGTCTCTACT AAAAATACAA AACCCAGCTG GGCGTGGTGG CAGGTGCCTG
 TAATCTCAAC CACTTGGGAG GCTGAGGCAG GACAATCGCT TGAACCTGGG AGGAGGAGGT
 TGCAGTGAAC CAAGATCATG CCATAGCACT CCAGCCTGGG CGACAAGGGC AAAACTCCGT
 TTCAAAAAAA AAAAAAAAAA
 N
 TTTTTTTTTT GTTACGGTCT TTAAGATATT GAAGAAGAAA TTGTTAAAAC ATTTGTAAAG
 TTCAGAACTG TCCAGGTTAA ATGCTTTAAA AAAAAAGGCT TAAAATAAAA AGCTAAGGAG
 TCATCAAGAA ATTGAATTTA TTATGAGTAA AATACAGAAC TTAATGAAAA CCATTTAAAA
 GAGCAAAAAA TCTAAGTAGT

  Submitted Frequency for ss80304474 back to top
There is no frequency submission for ss80304474.


  dbSNP summary of Genotypes for ss80304474 back to top
No sufficient data to compute Hardy-weinberg probability for ss80304474.


  Submitted individual genotype for ss80304474 back to top
There is no individual genotype data for ss80304474.

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