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Submitted SNP(ss) Details: ss80766413           
Submitter
HandleHGSV
Submitter SNP IDCor12878_DIV_20070510.chr5_137753401-137753402_1
RefSNP(rs#)rs3041292
Submitted Batch IDNA12878-Fosmids-20070510-DIPs
Submitted DateNov 26, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleGTGT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize83457452 361-366 35 reverse 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80766413|allelePos=442|len=936|taxid=9606|alleles='GTGT/-'|mol=Genomic
 AATAGTTTAA TTAAAACTCT CTCCCCTCTT TATAAGAGAA TAGCCCTTTT GTTTATCGGG
 AATCACTTTT TTTTTAATTG TAGTAAAATA CACATAATGT AAAACTTACG ACTTTAAAAT
 GTACAATTCT GTGGCATTTA GTACATTTAC AGTGTTGCGA AACTATGAAG ACTATCTAGA
 TCCAGAAATT TCATCACCCC AAAAGGAAAA CTCCATATCC ATTAAGTGGT GATGGAATAA
 TTTTTATTTC CAGTGTTTTA GAGTGAATAT TAAGGTATAT CATCCTCTAC TACTTGAAAG
 TAATCTATGG TTAGCAAGTC AAGTACTAGG ATCTGGGTTT TATTAAATTA ATAAATATAA
 GTTTGGGCTC ATACCTACCT ATGGGTCTCT TCTCTCTCTC TCTCTCTCTC TGTGTGTGTG
 TGTGTGTGTG TGTGTGTGTG T
 N
 CCCTTTCTCT TGTCTGTATC TGGGTACATT AATATATAGG AAAGTCCTTC CTTTTTTTTG
 TTTTTGTGAG GGAATCTTGC TCTGTTGCCA GGCTGGAGTG CAGTGGCACG ATCTGGGCTC
 ACTGCAACCT CCGCCTCCTG GGTTCAAGCA ATTCTCCTGC CTCAGCCTTC CGAGTAGCTG
 GGACTACAGG CACGTGCCAC CATGCCCGGC TCATTTTTTG TATTTTTAGT AGAGACAGGG
 TTTCACCGTG TTGGCCAGGA TGGTCTTGAC CTCCAGACCT CGTGATCCGC CCATGTCAGC
 CTCCCAAAGT ACTGGGATTA CAGGCATGAG CCACCGCGCC AGGCCCCATT CTTCTTTATA
 CAGTCATTCA CAAGCAGAAG TTAACATTTT GAAGGTAAAA GAAGGAAAGG GGAGTGTTCT
 GTTATTTCAT TCTTCAGTTA TGCTGAAGGC TTTTTTTGGG ATATTGTCAG TATATACATT
 TATCCTCTTT GGAT

  Submitted Frequency for ss80766413 back to top
There is no frequency submission for ss80766413.


  dbSNP summary of Genotypes for ss80766413 back to top
No sufficient data to compute Hardy-weinberg probability for ss80766413.


  Submitted individual genotype for ss80766413 back to top
There is no individual genotype data for ss80766413.

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