| Submitter | | Handle | HGSV | | Submitter SNP ID | Cor12878_DIV_20070510.chr1_181618183-181618184_1 | | RefSNP(rs#) | rs57406484 | | Submitted Batch ID | NA12878-Fosmids-20070510-DIPs | | Submitted Date | Nov 26, 2007 | | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Nov 26 2007 12:00:00:000AM |
| | Resource Links | | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | NA12878-FOSMIDS-DIPS | | Ascertainment Samplesize | 3 | | Population | N.D. |
| | Allele | | Observed Allele | T/- | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | DIV | | CpG Code | N.D. |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position quality orientation DIPsize85882087 334-336 43 reverse 1 |
>gnl|dbSNP|ss80820573|allelePos=392|len=707|taxid=9606|alleles='T/-'|mol=Genomic AAAATCTGCC CAGCCAATAT CTAGCCACGG ATCAACCCAC CTGCCCATTT TCCCGGCTGC
TTATTGCAGG CTTCCCAGCA GTACAGAAAA CACTGCTATG CTGTGCGCTT GGCTCCGCTG
CAGACAAATG AGCCCCAGCC TGGGCTGGAC TCATTGCTGT TCAGCAAACT TTTTCTTATC
CCCATGACTA TCTCTTCCAC TTTTTTTTTT TTTTTTCTTT GAGATGAAGT CTCACTCTGT
CGCCCAGGCT GGAGTGCAGT GGCGCGATCT CAGCTCATTG CAAGCTCCAC CTCCCGGGTT
CATGCCATTC TGCCTCAGCC TCCCGAGTAG CTGGGACTAC AGACACCCGC CACCACGCCC
GGCTAATTTT TTTTTTTTTT TTTTTTTTTT T
N
AGTAGAGACG GGGTTTCACC ATGTTAGCCA GGAAGGTCTT GATCTGACCT CGTGATCCGC
CCGCCTCGGC CTCCCAAAGT GCTGGGATTA CAGGCGTGAG CCACCCTGCC CGGCCGGTCT
CTTCCACTTT TCAAAGCAGC TCTCACATCT TCAAAAGTAT CCTTAAACTC CCTTCTCCAC
CCTCCCTTTA CTCAGACTTC CTCTTTTAAG CAAATGGAGA TATAATAAGT TTCATTTCTC
TTCTATCCAC CTCTAAGTTC ATCTCATCAT CTACTATACT TTCCTCCTCC TGTCCACCTC
AAAAGGAAGA CCCCC
There is no frequency submission for ss80820573.
No sufficient data to compute Hardy-weinberg probability for ss80820573.
There is no individual genotype data for ss80820573.
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