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Submitted SNP(ss) Details: ss81112833           
Submitter
HandleHGSV
Submitter SNP IDCor18956_DIV_20070510.chr21_18456624-18456625_1
RefSNP(rs#)rs397953638
Submitted Batch IDNA18956-Fosmids-20070510-DIPs
Submitted DateNov 27, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 27 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18956-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleCTCT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize71038440 541-546 34 reverse 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss81112833|allelePos=501|len=1001|taxid=9606|alleles='CTCT/-'|mol=Genomic
 TCCTAAGTGT ACAGCTGGTT GAGCTTTCAC AAAATGACAT ACACATGTTA TTACCACCCA
 CAAGATATTG TCAGTTCCCT AGAAGCGCAC TACCACCCTC CACCTGTAAT TTATGCTCTC
 TGCAAGTCAC TAACCACTAA CCCCTCTTTC TCCTCCTGTA TGTACCCAAA GATAGTCACT
 ATCCTGACCT CTAATGCCAT GAAATGATTT TGCCTGTTGT ATTAGTTTGT TAAGGCTGTC
 ATAACAAAGC ACCACAAAAT GGGTGGCATA AACAACAGAA ATTTATTGTC TCATGGTTAC
 GGAGGCTAAA AGCCCAACAT CAAGGTGTTA GCAGAGACAG TTCCTTCTGA GGGCCGTGAG
 GAAGAATTTG TTTCATCCCT CTTCCCTAAT TCTTGGTGGT TTGCTGACAA TTTTGGTATT
 TGTTGGCTTG TAGAAGTATC AGCCTGATCT GTGCCTTCAT ATTCACGTGG TGTTTTCTCT
 CTCTCTCTCT CTCTCTCTCT
 N
 TTCTCTTTCT CTCTCTCTCT CTGTGTATGT AAGTGTGTGT GTCTGTGTCT GTGTCCAAAT
 TTACCCATTT AATAAGGACA CTTGTCACGT TGGATTAGGG TCACACACTA TTCCACTATA
 ACTTCATATT ACTTAATTAC ATCTGCAATG ACCCTATTTC CAACAAAGGT CACATTTTGA
 GGTGCTGAAA GTGCGGTCTT CAACATTTGA ATGTGAAGTA GAAGAGATAA TTCCACCCAT
 AATAACTATT TTTAAACTTC AATTAAATAG AATTATATAC CATATATTCT TCTGTGTCAT
 CTTCTTTGAT TTGCTATTAC ATTAATGCAA CTTGTACATA TTGTGTTATT AGTCTTCCAT
 TTCTTTCTTT ATTTTTGTTT TTCTTTTCAA GATAGAGTCT CACTATGTTG CTTAGGCTAG
 ACTGAAACTC CTGGGCTCAA GAGACCCTTC TGCCTCAGCC TCCTGAGCAG CTGGGACTGC
 AGGTGTACAC CAACATGCTC

  Submitted Frequency for ss81112833 back to top
There is no frequency submission for ss81112833.


  dbSNP summary of Genotypes for ss81112833 back to top
No sufficient data to compute Hardy-weinberg probability for ss81112833.


  Submitted individual genotype for ss81112833 back to top
There is no individual genotype data for ss81112833.

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