NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss81854410           
Submitter
HandleHGSV
Submitter SNP IDCor18555_DIV_20070510.chr10_69952600-69952602_1
RefSNP(rs#)rs58143466
Submitted Batch IDNA18555-Fosmids-20070510-DIPs
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18555-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize94368985 47-48 42 reverse -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss81854410|allelePos=501|len=1001|taxid=9606|alleles='-/A'|mol=Genomic
 TCAGTGGTTG ACAAGGGTTG CAGATGAGAG GAGAGGATTG TCAAAGAAAA GTGGAAATAA
 AGCCAGGCAC AGTGGCTCAT GCCTGTAATT CTAACACATT GGGAGGCCAA GGCAGGTGGA
 TCACTTAAGG TCAGGAATTC GAGACCAGTC TGGCCAGAAT GGTGAAACCC GGTCTCCACT
 GAAAATACAA AAATTAGGCC AGGCACGGTG GCTCATGCCT GTAATCCCAG CACTTTCGGA
 GGCCGAGGCA GGCGGATCAC GAGGTCAGGA GATCAAGACC ATCCTTGCTA ACACGGTGAA
 ACCCCGTCTC TACTAAAAAT ACAAAAAATT AGCCAGGTGT GGTGACACAC GCCTATAGTC
 CCAGCTACTC GGGAGGCTGA GGCAGGAGAA TCACTTGAAC CTGGGAGCTG GAGGTTGTAG
 TGAGCCAAGA TTGCACCACT GCACTCTAGC CTAGGCAACA GAGTGAGATT CCTTCTCAAA
 AAAAAAAAAA AAAAAAAAAA
 N
 TTAGCCAGAA GTGGTGGCAC CCACCGGTAG TCCCAGCTAC TCTGGAAGCT GAGACAGGAG
 GATCACTTGA ACACGGGAGG TGGAGGTTGC AGTGATAATC AGGCCACTGC ACTCCAGCCT
 AGGCAACAAA GCGAGAATGT CTCAAAAAAA AAATAAAAGT GGAAATATTT TGGAACTACT
 CTATATCTTG ACTATGGTGG TCATTACACA ACATGTTTGT CAAAGTGCAT TTAACTTAGC
 CAACAACGAT AGCTCTTTTT ATTCCCCCTT TCACGGAATC TGGCTCTGTT GCTCAGGCTT
 GAGTGCAGTG CTGCGATCTG GGCTTACTGC GACCTCCGCC TCTCGCGTTC AAGTGATTCT
 CCTGCCTCAG CCTCCTGAGT AGCTGGGACT ACAACAGGTG GGCGCCACCA TGCCCAGCTA
 ATTTTTGTAT TTTTTGTACA GACTGGGTGT CACTATGTTG CCCAGGCTGG TCTCCAACTC
 ATTAGCTCAA GCTATCCCCG

  Submitted Frequency for ss81854410 back to top
There is no frequency submission for ss81854410.


  dbSNP summary of Genotypes for ss81854410 back to top
No sufficient data to compute Hardy-weinberg probability for ss81854410.


  Submitted individual genotype for ss81854410 back to top
There is no individual genotype data for ss81854410.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement