NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss81904667           
Submitter
HandleHGSV
Submitter SNP IDCor18555_DIV_20070510.chr15_83109153-83109155_1
RefSNP(rs#)rs397854274
Submitted Batch IDNA18555-Fosmids-20070510-DIPs
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18555-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize94757432 442-443 51 reverse -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss81904667|allelePos=229|len=729|taxid=9606|alleles='-/T'|mol=Genomic
 TTTCTTCTTT CCTTAGGTGG TGTTTGGACT CTAGACCATG TGCCTAGGTA GAAGTTTTTC
 CTTTCTCCGC AGCTCTGCTC CCCTAGCAAC GCTCGCCACA CCCTTGTTTT GAGATCCTCT
 CTAAGGTATG ATGTCTAGGC TGACCTGAAC TGGCCTTGAA AAGCCAAGAG TTTGAACATG
 AGATTTTTTT GTTCCCTGGA TTTTGTTTTG TTTTGTTTTG TTTTTTTT
 N
 GATGATAAAA TACATATAAC AAAAGTTACC ATTTTTAAGT GTGCAGCTCA GTGGCATTAA
 ATACATTCAC AGTTGTACAA GCATCACCAC TGTCCATCTC CAGAACCTGA TATCATCTCA
 TACTAAAACT CTGTACCTAT TAAACAGTAA CTCCCTCTCT CTCTCCTGCT AACCCCTGGC
 AACCAATTCT ACTTCTTGTC TCTATGAATT TGCCTACTCT AGGGACCTCA TGTAAGTGGA
 ATCATTCAGT ATTTGTCTGT TGTAGCATGT GTCAGAATTT CCTTCCTTTT TAAAGTTGAA
 TGATATTCCA TTGTGTGTAT ATACCACATT TTGTTTATCC TTTCATCTGT TGATAGATAC
 TTGGGTTACT TCCACCTTTG AGTGTTATGA ATAATCCTGC TATGAACATG GGTGTACAAG
 TATCTTGTGT CCTCCCGCTC TTAATTCTTT TGAGTATATA CCCAGAAGTG GAATTGCTGG
 ATCATATGGT AATTCTGTTT

  Submitted Frequency for ss81904667 back to top
There is no frequency submission for ss81904667.


  dbSNP summary of Genotypes for ss81904667 back to top
No sufficient data to compute Hardy-weinberg probability for ss81904667.


  Submitted individual genotype for ss81904667 back to top
There is no individual genotype data for ss81904667.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement