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Submitted SNP(ss) Details: ss82056800           
Submitter
HandleHGSV
Submitter SNP IDCor18956_DIV_20070510.chr15_56910551-56910552_1
RefSNP(rs#)rs61211927
Submitted Batch IDNA18956-Fosmids-20070510-DIPs
Submitted DateNov 27, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 27 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18956-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleATATAT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize75416962 393-400 45 forward 6

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82056800|allelePos=501|len=714|taxid=9606|alleles='ATATAT/-'|mol=Genomic
 GCATTTTAGA TAAGTGATAC TCAACCTGTA TAACTCATGC CTGAACGAAA CCTATCTAGC
 ACATGTATTT TCTCTATAAG GCACATCACA GCCTTTGTCT ACTGAATGCT AGCCAGCACT
 TTGGCATTAT GCTTGGATGC TGTTTGAAAC AGCAAAATCA CCAACAGAAA GCATAAAAAT
 GTGAAAAACA TGGCACTAAA TAGACCATGA AAGGGACACT TGTTTACAGT ATGCGAGAGA
 GCTGAAGCAA GAAGGCAGAA TGTTGCCTTG TTTGACCTCA GCTGGGAATG TGCACATTGG
 GCCACTCAGA ATTTTCACCA GTCTTCACAT GTCCACAAAC AAGCATGAAA ATGCTGCAAG
 TATTGATTTG GGGGATCTAA ATAAATTTTA GCCAGTTAGA TGAACTTGTA GATATGAACT
 TGCAATGAGG ATCGATTGTG TATATGAAGA TCAGTTGTGT GTGTGTGTGT GTGTGTGTGT
 GTATATATAT ATATATATAT
 N
 GTTTTAAATT ATACCCCGGA TCACTTCTGT ATATTTTATT GTATTTCAAA AACAAAAGCC
 ATAATATCTA TTTCCGAACT TGATACATCT ACATGAGTGG CATATGTTGG AGGAGATTAG
 CATAAAAATG GCATAAAAAA CCATTAAAAA TGGCATCATT TATCCCACGG CTTTCTGTTC
 AGCCTTATGC CTACTTTTAG TTTTAAAGCA AGA

  Submitted Frequency for ss82056800 back to top
There is no frequency submission for ss82056800.


  dbSNP summary of Genotypes for ss82056800 back to top
No sufficient data to compute Hardy-weinberg probability for ss82056800.


  Submitted individual genotype for ss82056800 back to top
There is no individual genotype data for ss82056800.

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