NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss82226700           
Submitter
HandleHGSV
Submitter SNP IDCor19129_DIV_20070510.chr22_44827015-44827016_1
RefSNP(rs#)rs59737741
Submitted Batch IDNA19129-Fosmids-20070510-DIPs
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19129-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleGAGT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize99450434 488-493 48 forward 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82226700|allelePos=201|len=401|taxid=9606|alleles='GAGT/-'|mol=Genomic
 GGTGGCCAGT CCAGCCTGAG GGGGTGGGGG TCTCAGAGAT TAAGTCAGGA GCCCAGAGTG
 CGTGCTTAGG GTGCAACCCA CCCCACAGCC TCCCCCAAGG CACCTCCCGG GGGTGCAGAT
 GGGGGCAGAC GCAGGGACAC TCAGGGTGGA CCACCTGACT GGGAGCTGAT CATGAGGTGT
 GCGACAGCCT GAGTCAGCCT
 N
 CAGCTCAGAG GAGCTGGGAT GGCCTTGATC TTCCCCCTCC GGCCACTCAC CACAGCTGGG
 AGGGTCCAAG GAGACCCTCA GCCACTGTCC CTTCAGCCCT CACCCCACCC TGGCTGGCTC
 TGCCCGGACA GTCCTTAGGG ACATCTTGGT CCTGCCCACC AGCCAGGGGA CCCAGAATTG
 GAGCAGGGGA GCAGGACCCC

  Submitted Frequency for ss82226700 back to top
There is no frequency submission for ss82226700.


  dbSNP summary of Genotypes for ss82226700 back to top
No sufficient data to compute Hardy-weinberg probability for ss82226700.


  Submitted individual genotype for ss82226700 back to top
There is no individual genotype data for ss82226700.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement