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Submitted SNP(ss) Details: ss82245779           
Submitter
HandleHGSV
Submitter SNP IDCor18555_DIV_20070510.chr16_23219843-23219844_1
RefSNP(rs#)rs60930177
Submitted Batch IDNA18555-Fosmids-20070510-DIPs
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18555-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleGTGT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize97364255 282-287 62 reverse 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82245779|allelePos=501|len=1001|taxid=9606|alleles='GTGT/-'|mol=Genomic
 CACTGATTTT TTTTTTTTGA AAAATATTTT TCAGCCAGGC ATGATGGCTC ACACCTGTTA
 TCTCAGCTCT TTGGGAGGCT GAAGTGGGAA GATTGCTTGA GGCCAGGTAT TTGAGACCAG
 CTTGGGTAAC ACAGCAAGAC TTTGTCTCCA GAAAAATAAA CTTTTTTTAA TTAGCCGGAA
 GCAGTGGCAC ACACACCTTG TAGTCCCAGC TAAGGCAGGA AGATGGCTTG AGCCCAAGAG
 TTTGAGGCTG CAGGGGTCAC ACCACTGCGC TCTAGCCTGG GCAACAAATT GAGACCCTGT
 CTCTCTTTAC CAAAAAAAGA AAAAAATTGT AAAAAAGCCT TTTATTTATG TCAACAAGTA
 GTGGGTTTAT TATAGTGTAA TGCATTAATA AATATTTTTA GGTATCAGTT TTAGTTTCTC
 ATATGGAAAG TATCATTATA TAAACAAAAT AACATATATG TGTTAAAAAC ACGTGTGTGT
 GTGTGTGTGT GTGTGTGTGT
 N
 ATTCCACATA AACAAAAAGT CTCAGGTATT CTGTAATTTT TAAAAGTACA GAAGATTCCT
 GGCTGGGCAT GGTGGCTCAC ACCTGTAATC CCAACACTTT GGGAGCCCGA GGCGGGTGGA
 TCACTTGAGT CCAGGAGTTC CAGACCAGCC TGGCCAATAT GAAGAAAACC CATCTCTACA
 AAAAACACAA ATTAGCCGGG CATGGTGGTG CATGCCTGTA ATCCCAGCTA CTAGGGAGGC
 TGAGGCAGGA GAATTGCTTG ATTCCGGGAA GTGGAGGTTA CAGTGAGCTG AGATGACACC
 ACTGCACTCC AGCCTGGGCA ACAGAGTGAG ACTCTGTCAA AAAAAAAAGA AAGAAAGAAA
 GAAGAAAGAG AGAGGTAGGG AGGGAGGGAG GTGGAGAGAG AGAGAGAGAA AGAAAGGAAA
 GAGAAAGAAA GAAAAGAAAA GAAAAATACA AAAGATTCCT AAGACCAAAA ATTTTGAGAA
 TGACTGCATT AAGACAATCT

  Submitted Frequency for ss82245779 back to top
There is no frequency submission for ss82245779.


  dbSNP summary of Genotypes for ss82245779 back to top
No sufficient data to compute Hardy-weinberg probability for ss82245779.


  Submitted individual genotype for ss82245779 back to top
There is no individual genotype data for ss82245779.

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