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Submitted SNP(ss) Details: ss83516264           
Submitter
HandleHGSV
Submitter SNP IDCor18517_DIV_20070510.chr11_74882918-74882921_1
RefSNP(rs#)rs55639442
Submitted Batch IDNA18517-Fosmids-20070510-DIPs
Submitted DateDec 04, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 4 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18517-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/TT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize59493927 287-288 52 reverse -2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss83516264|allelePos=501|len=1001|taxid=9606|alleles='-/TT'|mol=Genomic
 AGCTTGTCAA AGCCTTCCTC CCAGACAGCA GCGAGCACCA GTTTCTTGCA TAAGCAAGCA
 TCTCTATTCC GGTCTTGCTG TGCATCCTTT ATTTTGGCAT TTCTTCCTGC TCCAATTTGT
 GGTTCTAAAA GTACTCATGA ATTAGTGTGA TATTCACAAA AATGCACATG GTGGCTGAGG
 AACATCTTAC AACATTCTGC AACTCACATT ACTCACATTA ATGTAACATG AAGTCTGGTA
 TTAATTCTTT AAATTTGCAA CTAGATGGAC ATTGAATACT AGAACTGTGA ATAGTTTCAT
 TTCTATAAAA TTTTCAAAAA TTTAATTAAT ATTTCATGTC TATTTAAAGA TTTTATTTAA
 AAATCTGATC TTCATTAATT GTGATGGGTA TAGCTTTAAT TTTAATAGAT GATTTTATGG
 AATAAAAACA CTCTTGAAAA CATACAATAA ATTTTCCTAT GTTTATATTT ACATTCGTTT
 ACTTTTTTTT TTTTTTTTTT
 N
 GAGACAGAGT CTCGCTCTGT CACCCAGGCT GGAAGGCTGG AGTGCAGTGG TAAGATCTTG
 ATTCACTGCA ACCTCCGCCT CCCAGGTTCA AGTTATTTTC CTGCCTCAGC CTCCCAAGTG
 GCTGGGATTA CAGGCATGTG CCACCATGCC CAACTATTTT TCTATTTTTA GAAGAGATGG
 GCTTTCACCA TGTTGGCCAG GCTGGTCTCG AACTCCTGAC CTCAAGTGAT CTGCCTGCCT
 CAGCCTCAGT GCTGAGATTA CAGGTGTAAG CCACTGCATG TGGCCACAGT TCATTTTTAG
 TTATTCCATA AAATCTTTAC TTTAGCAAGA TCACTAATTA TATTGTTATA ATCAAGATTT
 TCATCACTTG TGTTCTGTTG ATGGCAATAA TCTAAAAGAC TAAAAGTAAA ATGTGATTGT
 ATTTAAAGTA CATAAAATTT GATGGCCAGA TGCGGTGGCT CACGCTTGTA ATCCCAGCAC
 TTTGAGGGCC TAGGCAGGCA

  Submitted Frequency for ss83516264 back to top
There is no frequency submission for ss83516264.


  dbSNP summary of Genotypes for ss83516264 back to top
No sufficient data to compute Hardy-weinberg probability for ss83516264.


  Submitted individual genotype for ss83516264 back to top
There is no individual genotype data for ss83516264.

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