NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss83926925           
Submitter
HandleHGSV
Submitter SNP IDCor19240_SNV_20070510.chr6_2781265
RefSNP(rs#)rs385955
Submitted Batch IDNA19240-Fosmids-20070510
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodNA19240-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality80464193 121 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss83926925|allelePos=201|len=401|taxid=9606|alleles='T/A'|mol=Genomic
 AAGCATGAAG CCCAGGAGCC ATACCTTCTT CAGGCCCGTG GACTCGTCCT CAATGTCATC
 CGGCAGCAGG ATGACCATGC TGAGCTCCTC GCCTTGGTAA GGCAGTTCCA GCACACGGCA
 CTTAAGGTCC TCGATGTAGC CATATGCAAA TTTTTTCTTC TGATACATCA TTTTCACAGT
 TTTTCTGTCT TTCTGAACAG
 W
 TTTAAAAAAT CACTGAAATT ATTCTCTGCA TTCTTTTAGA GCAATGCATG ACTCTGTACA
 GTTACCTCAC CTCACCTTAT TCAATCTGAA TGGTGCATTC GTCGTGGCTT CTTTCATGAA
 TTTATCCTTC CAGTTTCCCT TGAAATAGAT GGCATTTACT AGCACAAGTT TGGTCATGTT
 ATCAACCATG CCCGAAGCCA

  Submitted Frequency for ss83926925 back to top
There is no frequency submission for ss83926925.


  dbSNP summary of Genotypes for ss83926925 back to top
No sufficient data to compute Hardy-weinberg probability for ss83926925.


  Submitted individual genotype for ss83926925 back to top
There is no individual genotype data for ss83926925.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement