NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss87836432           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0132728
RefSNP(rs#)rs1205
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=C|Alt=T|Chr=chr1|Position=157948857|Strand=+|dbSNP=+|Score=208|Reads=8:8:8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss87836432|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 TGGGAAGTGT AAACTTACAG GGACTTGATT TCAAAGGTCA TTAGAGAAGT TAGTCACAAC
 TTCTAAAGCA ACTATCAGAA AACAGCTTGG ACTCACTCAA GTAAACAGGG GCTTTATTGG
 CTTATAGACC TGGGCAGTCC AGGTGTAGAT CTGGTTCCAG ACAAGGCTGA TTCAGAGACT
 CCACGTGGTC AAGGCTCTGT TGTTTGTCAA TCCCTTGGCT CCTCCACTTC CAGTTTGGCT
 TCTGTCCTCA
 Y
 AGTCTCTCTC CATGTGGCAA ACAAGATGGC TACTGGTGGT CCCAGGTTCA CGTCCTCTCA
 GCTTGGAAAT CCAGCAGCAA GAAGATGTCT CACTCCCAAA GTCCATAACT CAATCCTTGG
 GAAGACTGTA GTTGGTCCTG CTAGGAACAC GTAACTATCC AACTATCCTC CAGATAGGGA
 GCTGGGGAGA TGGGAGATGG GCTCCTCTGA CAGGACACCC TGTGGTTCAC GTCCACTCTT
 GTGGCCTGGG

  Submitted Frequency for ss87836432 back to top
There is no frequency submission for ss87836432.


  dbSNP summary of Genotypes for ss87836432 back to top
No sufficient data to compute Hardy-weinberg probability for ss87836432.


  Submitted individual genotype for ss87836432 back to top
There is no individual genotype data for ss87836432.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement