Submitted SNP(ss) Details: ss9603

Submitted SNP(ss) Details: ss9603

Submitter
Handle	CGAP-GAI
Submitter SNP ID	50389
RefSNP(rs#)	rs1205
Submitted Batch ID	CANDIDATES.UG.4.20.99
Submitted Date	Aug 23, 1999
Publication Cited	[1] Reliable identification of large numbers of candidate SNPs from public EST data
First entry to dbSNP	Aug 23 1999 12:00:00:000AM

Resource Links
GenBank Accession	T53812 M11725 M11880
Submitted Gene Name	CRP
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	cDNA
Method	DEMIGLACE
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable
In Expressed Sequence	Y

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
Candidate SNP predicted from aligned EST sequences.UniGene cluster ID from 4/20/99 build: Hs.76452SNP previously reported by Whitehead Institue.

Fasta sequence (Legend)

 CTGGTTCCAG ACAAGGCTGA TTCAGAGACT CCACGTGGTC AAGGCTCTGT TGTTTGTCAA
 TCCCTTGGCT CCTCCACTTC CAGTTTGGCT TCTGTCCTCA
 Y
 AGTCTCTCTC CATGTGGCAA ACAAGATGGC TACTGGTGGT CCCAGGTTCA CGTCCTCTCA
 GCTTGGAAAT CCAGCAGCAA GAAGATGTCT CACTCCCAAA

Submitted Frequency for ss9603

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
POOLED_CEPH - MULTI-NATIONAL	188	T=0.62199998	C=0.37799999	0.470 +/-0.024			VALIDATED_01	CGAP-GAI

dbSNP summary of Genotypes for ss9603

No sufficient data to compute Hardy-weinberg probability for ss9603.

Submitted individual genotype for ss9603

There is no individual genotype data for ss9603.

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