NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss98024549           
Submitter
HandleHUMANGENOME_JCVI
Submitter SNP ID1103652280782
RefSNP(rs#)rs56963159
Submitted Batch ID1.30
Submitted DateMar 30, 2008
Publication Cited17803354
First entry to dbSNPMar 30 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWGS-ASSEMBLY-ATAC-MAPPING
Ascertainment Samplesize2
PopulationJ. Craig Venter
Allele
Observed AlleleTGTGTG/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss98024549|allelePos=251|len=501|taxid=9606|alleles='TGTGTG/-'|mol=Genomic
 GTCATCTCAT AAGGTCACTG TGTGTTTTTC TATTTTTCCT TATTAAATTA TAATGAGCTC
 CTTGAGGATA AAAACGATAT TTTATTCATT TTACATTTTC TCTCCTCTAG TATATGCCAT
 AGAATTATGC TCAATCCAGA GGAGACACAA TGAGTGAATA AAGGGAGGGA AAAAAAATGA
 ATGTATATTT TAAAACTAGA GAGAGATTCG TGTCTCCATA TTCTATCCAG GGTTGCTACA
 GTATGTGTAC
 N
 TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGCG CGCGCGCGCG CGCACCTATG
 TGTCTAAGGC AAGTTGGTGA GAAATACTGC AGTTTAGTAG GAAAAAAACC AATGGACTAG
 GAATCGAAAA TCCTGAGTTC TGATCCCATT CTCCCATTCA CTGCTAGTGT ATGACCTTGT
 GCATAGAATG TTCCCACTCT GAGCTTCAGT TTTGAACTGC AAAGTCCTTT CTGGCTCTTG
 TAAGACTGTC

  Submitted Frequency for ss98024549 back to top
There is no frequency submission for ss98024549.


  dbSNP summary of Genotypes for ss98024549 back to top
No sufficient data to compute Hardy-weinberg probability for ss98024549.


  Submitted individual genotype for ss98024549 back to top
There is no individual genotype data for ss98024549.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement