NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:HUMANGENOME_JCVI
Submitter Batch ID:1.64
Submitter Method ID:WGS-ASSEMBLY-ATAC-MAPPING
Citation:The diploid genome sequence of an individual human.
Population:J. Craig Venter
Comment:Whole genome shotgun sequencing and assembly was used to identify heterozygous variants. Human genome assembly comparison using ATAC were performed to identify homozygous variants.
Batch Total SubSNP(ss) Count:421


SubSNP(ss) Submitter
SNP_ID		 SNP
Allele		 Samplesize RefSNP(rs) ss2rs
Orien		 Chr ChrPos Contig
Accession		 Contig
Pos
ss96616188 1103645397703 AT/CA 2 rs71376571 0 16 115772 NT_010393.17 105772
ss96616189 1103645397810 CA/TG 2 rs74207581 0 16 160509 NT_010393.17 150509
ss96616191 1103645398285 AG/CA 2 rs71376573 0 16 373809 NT_010393.17 363809
ss96616192 1103645398289 AG/CT 2 rs71376574 0 16 373843 NT_010393.17 363843
ss96616193 1103645398309 GC/TG 2 rs71376575 0 16 378206 NT_010393.17 368206
ss96616194 1103645398311 GC/TG 2 rs71376576 0 16 378242 NT_010393.17 368242
ss96616195 1103645398318 GC/TG 2 rs71376577 0 16 378350 NT_010393.17 368350
ss96616196 1103645398329 GG/TA 2 rs71376578 0 16 382090 NT_010393.17 372090
ss96616197 1103645398506 AA/GC 2 rs71376579 0 16 468268 NT_010393.17 458268
ss96616198 1103645398548 AT/TG 2 rs71376580 0 16 488329 NT_010393.17 478329
ss96616199 1103645399044 CT/TC 2 rs71376581 0 16 758811 NT_010393.17 748811
ss96616201 1103645399343 CT/TC 2 rs71376583 0 16 904210 NT_010393.17 894210
ss96616203 1103645399584 AG/CC 2 rs71376585 0 16 948773 NT_010393.17 938773
ss96616204 1103645399585 AG/CC 2 rs71376586 0 16 948891 NT_010393.17 938891
ss96616205 1103645399997 ACA/CGT 2 rs71376587 0 16 1092726 NT_010393.17 1082726
ss96616209 1103645400382 CAG/TGA 2 rs35646486 0 16 1255830 NT_010393.17 1245830
ss96616211 1103645400815 AA/CC 2 rs71376592 0 16 1441758 NT_010393.17 1431758
ss96616214 1103645400941 AG/CT 2 rs71376595 0 16 1459804 NT_010393.17 1449804
ss96616213 1103645400940 CT/TG 2 rs71376594 0 16 1459990 NT_010393.17 1449990
ss96616215 1103645401511 CT/TC 2 rs71376596 0 16 1768151 NT_010393.17 1758151
ss96616216 1103645401514 AA/TG 2 rs71376597 0 16 1769019 NT_010393.17 1759019
ss96616187 1103645397601 CA/GG 2 N.D. N.D.
ss96616190 1103645397842 CT/TC 2 N.D. N.D.
ss96616202 1103645399344 CT/TC 2 N.D. N.D.
ss96616206 1103645400282 CA/GG 2 N.D. N.D.
ss96616207 1103645400287 AG/GA 2 N.D. N.D.
ss96616208 1103645400288 AT/GC 2 N.D. N.D.
ss96616210 1103645400476 CC/TT 2 N.D. N.D.
ss96616212 1103645400937 AG/CT 2 rs36142720 0 N.D. N.D.
ss96616200 1103645399339 CT/TC 2 rs71376582 0 N.D. N.D.
30 of 421 subsnp's starting at ss96616188. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement