NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:HUMANGENOME_JCVI
Submitter Batch ID:1.30
Submitter Method ID:WGS-ASSEMBLY-ATAC-MAPPING
Citation:The diploid genome sequence of an individual human.
Population:J. Craig Venter
Comment:Whole genome shotgun sequencing and assembly was used to identify heterozygous variants. Human genome assembly comparison using ATAC were performed to identify homozygous variants.
Batch Total SubSNP(ss) Count:14087


SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss98021942 1103652209485 -/A 2 rs71525330 0 8 227554 NT_023736.18 167554
ss98021943 1103652209506 -/C 2 rs71525331 0 8 258449 NT_023736.18 198449
ss98021944 1103652209507 -/A 2 rs71525332 0 8 258458 NT_023736.18 198458
ss98021945 1103652209512 -/A 2 rs67711793 0 8 262593 NT_023736.18 202593
ss98021948 1103652209673 -/T 2 rs34900989 0 8 371973 NT_023736.18 311973
ss98021949 1103652209683 -/T 2 rs11364784 0 8 381885 NT_023736.18 321885
ss98021950 1103652209695 A/C 2 rs10113388 0 8 386032 NT_023736.18 326032
ss98021951 1103652209743 CA/TG 2 rs35307923 0 8 392957 NT_023736.18 332957
ss98021953 1103652209775 AC/GT 2 rs71525333 0 8 402343 NT_023736.18 342343
ss98021954 1103652209777 -/C 2 rs71202616 0 8 402392 NT_023736.18 342392
ss98021955 1103652209781 C/G 2 rs4990906 0 8 403626 NT_023736.18 343626
ss98021956 1103652209830 -/CACA 2 rs71525335 0 8 405262 NT_023736.18 345262
ss98021957 1103652209848 -/C 2 rs71525336 0 8 412244 NT_023736.18 352244
ss98021958 1103652209881 -/T 2 rs71525337 0 8 425598 NT_023736.18 365598
ss98021959 1103652209929 -/TT 2 rs34339077 0 8 437740 NT_023736.18 377740
ss98021960 1103652209954 -/TAAAAG 2 rs71525338 0 8 449081 NT_023736.18 389081
ss98021961 1103652209962 -/ACAT 2 rs71525339 0 8 452426 NT_023736.18 392426
ss98021962 1103652209998 -/G 2 rs34721814 0 8 463968 NT_023736.18 403968
ss98021963 1103652210004 -/CT 2 rs35458213 0 8 469055 NT_023736.18 409055
ss98021964 1103652210014 -/TGTT 2 rs71525340 0 8 473743 NT_023736.18 413743
ss98021965 1103652210028 -/A 2 rs34449715 0 8 478871 NT_023736.18 418871
ss98021966 1103652210033 -/T 2 rs61228003 0 8 481220 NT_023736.18 421220
ss98021967 1103652210078 -/TC 2 rs34931074 0 8 498886 NT_023736.18 438886
ss98021968 1103652210109 -/C 2 rs71525341 0 8 512273 NT_023736.18 452273
ss98021969 1103652210120 -/AA 2 rs36060467 0 8 513110 NT_023736.18 453110
ss98021970 1103652210150 -/A 2 rs34557269 0 8 525308 NT_023736.18 465308
ss98021971 1103652210196 -/TTG 2 rs35697562 0 8 530213 NT_023736.18 470213
ss98021946 1103652209644 -/TAGG 2 N.D. N.D.
ss98021947 1103652209643 -/GCAGCAGATAGGTAGGTAGGTAGGTAGATAGGCAG 2 N.D. N.D.
ss98021952 1103652209759 -/AAG 2 rs869169811 0 N.D. N.D.
30 of 14087 subsnp's starting at ss98021942. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement