LOCUS NP_001331730 1239 aa linear PLN 20-OCT-2022
DEFINITION cleavage and polyadenylation specificity factor 160 [Arabidopsis
thaliana].
ACCESSION NP_001331730
VERSION NP_001331730.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_001344951.1
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 1239)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (residues 1 to 1239)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 1239)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 1239)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to ANM70095.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..1239
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
Protein 1..1239
/product="cleavage and polyadenylation specificity factor
160"
/calculated_mol_wt=135164
Region 79..1225
/region_name="SFT1"
/note="Pre-mRNA cleavage and polyadenylation specificity
factor [RNA processing and modification]; COG5161"
/db_xref="CDD:227490"
CDS 1..1239
/gene="CPSF160"
/locus_tag="AT5G51660"
/gene_synonym="ATCPSF160; cleavage and polyadenylation
specificity factor 160; K17N15.21; K17N15_21"
/coded_by="NM_001344951.1:143..3862"
/db_xref="GeneID:835240"
/db_xref="Araport:AT5G51660"
/db_xref="TAIR:AT5G51660"
ORIGIN
1 msfaaykmmh wptgvencas gyithslsds tlqipivsvh ddieaewpnp krgigplpnv
61 vitaanilev yivraqeegn tqelrnpkla krggvmdgvy gvslelvchy rlhgnvesia
121 vlpmgggnss kgrdsiiltf rdakisvlef ddsihslrmt smhcfegpdw lhlkrgresf
181 prgplvkvdp qgrcggvlvy glqmiilkts qvgsglvgdd dafssggtvs arvessyiin
241 lrdlemkhvk dfvflhgyie pvivilqeee htwagrvswk hhtcvlsals instlkqhpv
301 iwsainlphd aykllavpsp iggvlvlcan tihyhsqsas calalnnyas sadssqelpa
361 snfsveldaa hgtwisndva llstksgell lltliydgra vqrldlsksk asvlasdits
421 vgnslfflgs rlgdsllvqf scrsgpaasl pglrdededi egeghqakrl rmtsdtfqdt
481 igneelslfg stpnnsdsaq ksfsfavrds lvnvgpvkdf ayglrinada natgvskqsn
541 yelvccsghg kngalcvlrq sirpemitev elpgckgiwt vyhkssrghn adsskmaade
601 deyhayliis leartmvlet adlltevtes vdyyvqgrti aagnlfgrrr viqvfehgar
661 ildgsfmnqe lsfgasnses nsgsesstvs svsiadpyvl lrmtddsirl lvgdpstctv
721 sisspsvleg skrkisactl yhdkgpepwl rkastdawls sgvgeavdsv dggpqdqgdi
781 ycvvcyesga leifdvpsfn cvfsvdkfas grrhlsdmpi heleyelnkn sedntsskei
841 kntrvvelam qrwsghhtrp flfavladgt ilcyhaylfd gvdstkaens lssenpaaln
901 ssgssklrnl kflripldts tregtsdgva sqritmfkni sghqgfflsg srpgwcmlfr
961 erlrfhsqlc dgsiaaftvl hnvncnhgfi yvtaqgvlki cqlpsasiyd nywpvqkipl
1021 katphqvtyy aeknlypliv sypvskplnq vlsslvdqea gqqldnhnms sddlqrtytv
1081 eefeiqilep ersggpwetk akipmqtseh altvrvvtll nastgenetl lavgtayvqg
1141 edvaargrvl lfsfgkngdn sqnvvtevys relkgaisav asiqghllis sgpkiilhkw
1201 ngtelngvaf fdapplyvvs mnvvrftsla rlpsavlvl
//