LOCUS EDL85543 865 aa linear ROD 26-JUL-2016
DEFINITION WD repeat domain 3 (predicted), isoform CRA_d [Rattus norvegicus].
ACCESSION EDL85543
VERSION EDL85543.1
DBLINK BioProject: PRJNA13999
BioSample: SAMN03000701
DBSOURCE accession CH474015.2
KEYWORDS .
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (residues 1 to 865)
AUTHORS Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
TITLE Gene and alternative splicing annotation with AIR
JOURNAL Genome Res. 15 (1), 54-66 (2005)
PUBMED 15632090
REFERENCE 2 (residues 1 to 865)
AUTHORS Mural,R.J., Li,P.W., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
Barnstead,M., Chin,S.H., Dew,I., Evans,C.A., Ferriera,S.,
Flanigan,M., Fosler,C., Glodek,A., Gu,Z., Holt,R.A., Jennings,D.,
Kraft,C.L., Lu,F., Nguyen,T., Nusskern,D.R., Pfannkoch,C.M.,
Sitter,C., Sutton,G.G., Venter,J.C., Wang,Z., Woodage,T.,
Zheng,X.H. and Zhong,F.
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2005) Celera Genomics, 45 W. Gude Dr., Rockville,
MD 20850, USA
REFERENCE 3 (residues 1 to 865)
AUTHORS Mural,R.J., Li,P.W., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
Barnstead,M., Chin,S.H., Dew,I., Evans,C.A., Ferriera,S.,
Flanigan,M., Fosler,C., Glodek,A., Gu,Z., Holt,R.A., Jennings,D.,
Kraft,C.L., Lu,F., Nguyen,T., Nusskern,D.R., Pfannkoch,C.M.,
Sitter,C., Sutton,G.G., Venter,J.C., Wang,Z., Woodage,T.,
Zheng,X.H. and Zhong,F.
TITLE Direct Submission
JOURNAL Submitted (02-SEP-2005) Celera Genomics, 45 W. Gude Dr., Rockville,
MD 20850, USA
COMMENT Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..865
/organism="Rattus norvegicus"
/strain="BN; Sprague-Dawley"
/db_xref="taxon:10116"
/chromosome="2"
Protein 1..865
/product="WD repeat domain 3 (predicted), isoform CRA_d"
Region 69..105
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 74..624
/region_name="WD40"
/note="WD40 repeat [General function prediction only];
COG2319"
/db_xref="CDD:441893"
Region 110..146
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 153..188
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 384..416
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 422..469
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 474..510
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 517..552
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 558..594
/region_name="WD40 repeat"
/note="WD40 repeat [structural motif]"
/db_xref="CDD:293791"
Region 726..829
/region_name="Utp12"
/note="Dip2/Utp12 Family; pfam04003"
/db_xref="CDD:461125"
CDS 1..865
/gene="Wdr3_predicted"
/locus_tag="rCG_52071"
/coded_by="complement(join(CH474015.2:5526732..5526887,
CH474015.2:5527085..5527178,CH474015.2:5528123..5528251,
CH474015.2:5529832..5529875,CH474015.2:5530456..5530503,
CH474015.2:5530700..5530792,CH474015.2:5531201..5531266,
CH474015.2:5531665..5531715,CH474015.2:5531956..5532090,
CH474015.2:5532544..5532655,CH474015.2:5532782..5532882,
CH474015.2:5533751..5533807,CH474015.2:5534498..5534633,
CH474015.2:5534768..5534853,CH474015.2:5536131..5536232,
CH474015.2:5537935..5538028,CH474015.2:5539204..5539308,
CH474015.2:5540097..5540194,CH474015.2:5540876..5540977,
CH474015.2:5541148..5541261,CH474015.2:5542079..5542174,
CH474015.2:5543542..5543620,CH474015.2:5544504..5544622,
CH474015.2:5546454..5546663,CH474015.2:5547478..5547648))"
/note="gene_id=rCG52071.0 transcript_id=rCT52071.0
protein_id=rCP18354.0 isoform=CRA_d"
/db_xref="GeneID:310720"
ORIGIN
1 mgltkqylry vasavfglig sqkgnivfvt lrgekgryva vpacehvfiw dlrkgekili
61 lqglkqevtc lcpspdglhl avgyedgair vfsllsgegn itfnghraav tslkydqlgg
121 rlasgskdtd viiwdvines glyrlkghkd avtqalflre rnllvtsgkd tmvkwwdldn
181 qhcfktmvgh rtevwglvlv seetrlitga adselrawdi aylqeiddpe epepkkikec
241 pgiqdtpeae drtleaddek sedrilscrk agslmregrd rvvnlavdkt grilachgtd
301 svlevfcils kaevqkkmdk klkkarkkar lnsaneeedp etsvsmtlqd eilrvtkikt
361 sakikstlqc irtmpceyal csffvpgdrq vvigtktgnm qlydlasgnl letiaahdga
421 lwsmslspdq rgfvtggadk avkfwdfelv tdknstqkrl svkqtrilql dedvlyvcys
481 pdqrllavsl ldctvkifyv dtlkfflsly ghklpvicmd ishdgaliat gsadrnvkiw
541 gldfgdchrs lfahddsvmh lrfvpkshlf ftagkdhkik qwdadkfehi qtleghhqei
601 wclavspsgd yvvsashdks lrlwertrep lileeerelq reaeyeesva keeqpavpge
661 tqgdnyftgk ktietvkaae rimeaielyr eetakmkehr aicraagkev plpvnpilma
721 hgnispsayv letfkgirss eleeallvlp fsyvpdiltl fngfiqtgsd vellcrclff
781 llrihfgqit snqmlvpvie klkettiskv rqvqdvigfn maglnylkre ceaksevmff
841 aeatshleek krkrknrrkm iltlt
//