U.S. flag

An official website of the United States government

WD repeat domain 3 (predicted), isoform CRA_d [Rattus norvegicus]

GenBank: EDL85543.1

Identical Proteins FASTA Graphics 

LOCUS       EDL85543                 865 aa            linear   ROD 26-JUL-2016
DEFINITION  WD repeat domain 3 (predicted), isoform CRA_d [Rattus norvegicus].
ACCESSION   EDL85543
VERSION     EDL85543.1
DBLINK      BioProject: PRJNA13999
            BioSample: SAMN03000701
DBSOURCE    accession CH474015.2
KEYWORDS    .
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 865)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res. 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   2  (residues 1 to 865)
  AUTHORS   Mural,R.J., Li,P.W., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S.H., Dew,I., Evans,C.A., Ferriera,S.,
            Flanigan,M., Fosler,C., Glodek,A., Gu,Z., Holt,R.A., Jennings,D.,
            Kraft,C.L., Lu,F., Nguyen,T., Nusskern,D.R., Pfannkoch,C.M.,
            Sitter,C., Sutton,G.G., Venter,J.C., Wang,Z., Woodage,T.,
            Zheng,X.H. and Zhong,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUL-2005) Celera Genomics, 45 W. Gude Dr., Rockville,
            MD 20850, USA
REFERENCE   3  (residues 1 to 865)
  AUTHORS   Mural,R.J., Li,P.W., Adams,M.D., Amanatides,P.G., Baden-Tillson,H.,
            Barnstead,M., Chin,S.H., Dew,I., Evans,C.A., Ferriera,S.,
            Flanigan,M., Fosler,C., Glodek,A., Gu,Z., Holt,R.A., Jennings,D.,
            Kraft,C.L., Lu,F., Nguyen,T., Nusskern,D.R., Pfannkoch,C.M.,
            Sitter,C., Sutton,G.G., Venter,J.C., Wang,Z., Woodage,T.,
            Zheng,X.H. and Zhong,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-SEP-2005) Celera Genomics, 45 W. Gude Dr., Rockville,
            MD 20850, USA
COMMENT     Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Rattus norvegicus"
                     /strain="BN; Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="2"
     Protein         1..865
                     /product="WD repeat domain 3 (predicted), isoform CRA_d"
     Region          69..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          74..624
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          110..146
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          384..416
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          422..469
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          474..510
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          517..552
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          558..594
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          726..829
                     /region_name="Utp12"
                     /note="Dip2/Utp12 Family; pfam04003"
                     /db_xref="CDD:461125"
     CDS             1..865
                     /gene="Wdr3_predicted"
                     /locus_tag="rCG_52071"
                     /coded_by="complement(join(CH474015.2:5526732..5526887,
                     CH474015.2:5527085..5527178,CH474015.2:5528123..5528251,
                     CH474015.2:5529832..5529875,CH474015.2:5530456..5530503,
                     CH474015.2:5530700..5530792,CH474015.2:5531201..5531266,
                     CH474015.2:5531665..5531715,CH474015.2:5531956..5532090,
                     CH474015.2:5532544..5532655,CH474015.2:5532782..5532882,
                     CH474015.2:5533751..5533807,CH474015.2:5534498..5534633,
                     CH474015.2:5534768..5534853,CH474015.2:5536131..5536232,
                     CH474015.2:5537935..5538028,CH474015.2:5539204..5539308,
                     CH474015.2:5540097..5540194,CH474015.2:5540876..5540977,
                     CH474015.2:5541148..5541261,CH474015.2:5542079..5542174,
                     CH474015.2:5543542..5543620,CH474015.2:5544504..5544622,
                     CH474015.2:5546454..5546663,CH474015.2:5547478..5547648))"
                     /note="gene_id=rCG52071.0 transcript_id=rCT52071.0
                     protein_id=rCP18354.0 isoform=CRA_d"
                     /db_xref="GeneID:310720"
ORIGIN      
        1 mgltkqylry vasavfglig sqkgnivfvt lrgekgryva vpacehvfiw dlrkgekili
       61 lqglkqevtc lcpspdglhl avgyedgair vfsllsgegn itfnghraav tslkydqlgg
      121 rlasgskdtd viiwdvines glyrlkghkd avtqalflre rnllvtsgkd tmvkwwdldn
      181 qhcfktmvgh rtevwglvlv seetrlitga adselrawdi aylqeiddpe epepkkikec
      241 pgiqdtpeae drtleaddek sedrilscrk agslmregrd rvvnlavdkt grilachgtd
      301 svlevfcils kaevqkkmdk klkkarkkar lnsaneeedp etsvsmtlqd eilrvtkikt
      361 sakikstlqc irtmpceyal csffvpgdrq vvigtktgnm qlydlasgnl letiaahdga
      421 lwsmslspdq rgfvtggadk avkfwdfelv tdknstqkrl svkqtrilql dedvlyvcys
      481 pdqrllavsl ldctvkifyv dtlkfflsly ghklpvicmd ishdgaliat gsadrnvkiw
      541 gldfgdchrs lfahddsvmh lrfvpkshlf ftagkdhkik qwdadkfehi qtleghhqei
      601 wclavspsgd yvvsashdks lrlwertrep lileeerelq reaeyeesva keeqpavpge
      661 tqgdnyftgk ktietvkaae rimeaielyr eetakmkehr aicraagkev plpvnpilma
      721 hgnispsayv letfkgirss eleeallvlp fsyvpdiltl fngfiqtgsd vellcrclff
      781 llrihfgqit snqmlvpvie klkettiskv rqvqdvigfn maglnylkre ceaksevmff
      841 aeatshleek krkrknrrkm iltlt
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

  • RefSeq protein
    See the reference protein sequence for WD repeat-containing protein 3 (NP_001101175.1).

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.