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Major facilitator superfamily protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_179257.1

Identical Proteins FASTA Graphics 

LOCUS       NP_179257                546 aa            linear   PLN 20-OCT-2022
DEFINITION  Major facilitator superfamily protein [Arabidopsis thaliana].
ACCESSION   NP_179257
VERSION     NP_179257.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_127218.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 546)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (residues 1 to 546)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 546)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 546)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEC06523.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     Protein         1..546
                     /product="Major facilitator superfamily protein"
                     /calculated_mol_wt=58846
     Region          13..515
                     /region_name="MFS_Mch1p_like"
                     /note="Monocarboxylate transporter-homologous (Mch) 1
                     protein and similar transporters of the Major Facilitator
                     Superfamily of transporters; cd17354"
                     /db_xref="CDD:340912"
     Site            order(24..25,28..29,32,66,123..124,126..128,131,150,
                     153..154,157,337,340..341,344..346,349,374,378,432..433,
                     437,441,457,460..461,464..465,468)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340912"
     CDS             1..546
                     /locus_tag="AT2G16660"
                     /gene_synonym="T24I21.7; T24I21_7"
                     /coded_by="NM_127218.4:299..1939"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH807762.1,INSD:EL227375.1,INSD:EH848891.1,
                     INSD:BP853257.1,INSD:EL125971.1,INSD:EL010402.1,
                     INSD:F20091.1,INSD:EL151984.1,INSD:EH807573.1,
                     INSD:DR380176.1,INSD:EL076267.1,INSD:EH866656.1,
                     INSD:EL221828.1,INSD:EL047239.1,INSD:EL264598.1,
                     INSD:EL217668.1,INSD:EG518987.1,INSD:EL180554.1,
                     INSD:AV545432.1,INSD:EL298172.1,INSD:AV829127.1,
                     INSD:ES201549.1,INSD:DR227507.1,INSD:EH838532.1,
                     INSD:EH922554.1,INSD:EL995101.1,INSD:EL268472.1,
                     INSD:AV823252.1,INSD:EL080557.1,INSD:BX839562.1,
                     INSD:EL083949.1,INSD:EL133150.1,INSD:BP839035.1,
                     INSD:EL289961.1,INSD:BP853256.1,INSD:EL069816.1,
                     INSD:EL104748.1,INSD:EH958099.1,INSD:BP589838.1,
                     INSD:EG518986.1,INSD:EL211414.1,INSD:EL129844.1,
                     INSD:DR227508.1,INSD:EL257629.1,INSD:EL053016.1,
                     INSD:BX839160.1,INSD:EL986882.1,INSD:EL337406.1,
                     INSD:EL151998.1,INSD:EL060179.1,INSD:AV808856.1,
                     INSD:ES113299.1,INSD:EL093935.1,INSD:EL340368.1,
                     INSD:DR227505.1,INSD:BX839261.1,INSD:EH951646.1,
                     INSD:EL232465.1,INSD:EL264328.1,INSD:AV804512.1,
                     INSD:AV555992.1,INSD:EH875659.1,INSD:AI998806.1,
                     INSD:BX835466.1,INSD:EL126465.1,INSD:EH868780.1,
                     INSD:BP816248.1,INSD:EL056431.1,INSD:EH880382.1,
                     INSD:ES059002.1,INSD:EL152427.1,INSD:ES146442.1,
                     INSD:EL132280.1,INSD:EH931750.1,INSD:AV527965.1,
                     INSD:EL160235.1,INSD:DR227506.1,INSD:EH982324.1,
                     INSD:EH843612.1,INSD:EL217538.1,INSD:ES151832.1,
                     INSD:EL077597.1,INSD:AV810471.1,INSD:EL280680.1,
                     INSD:EH818851.1,INSD:EL213769.1,INSD:EL113828.1,
                     INSD:ES087983.1,INSD:DR227504.1,INSD:ES018235.1,
                     INSD:BP788778.1,INSD:AV521232.1,INSD:EL133167.1,
                     INSD:EL186247.1,INSD:EL216593.1,INSD:EH986881.1,
                     INSD:F20092.1,INSD:EL144220.1,INSD:EL068869.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY070369.1,INSD:AY095988.1,INSD:BT000835.1,
                     INSD:BT000802.1,INSD:BX820049.1,INSD:BX820854.1,
                     INSD:BX819966.1,INSD:BX819745.1,INSD:BX820471.1"
                     /note="Major facilitator superfamily protein; INVOLVED IN:
                     response to karrikin; LOCATED IN: endomembrane system;
                     EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
                     growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like
                     (InterPro:IPR010658), Major facilitator superfamily,
                     general substrate transporter (InterPro:IPR016196); BEST
                     Arabidopsis thaliana protein match is: Major facilitator
                     superfamily protein (TAIR:AT4G34950.1); Has 3381 Blast
                     hits to 3270 proteins in 872 species: Archae - 26;
                     Bacteria - 1620; Metazoa - 6; Fungi - 314; Plants - 598;
                     Viruses - 0; Other Eukaryotes - 817 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G16660"
                     /db_xref="GeneID:816167"
                     /db_xref="TAIR:AT2G16660"
ORIGIN      
        1 mgfqrsisss salkwlgfvt avwvqsisgn nytfsnysga lkslmnlnql elnnlsvakd
       61 vgkafgilag lasdrlptpv illigcfegl lgygvqwlvv srtiqpipyw qmciflcmgg
      121 nsttwmntav lvtcirnfrr nrgpvsgilk gyvglstaif tdlctalfsn dpasflvlla
      181 vvpfavclta vfflreippa ssaaeeneet ryftifniva vvvavylqsy diigiktgvf
      241 svafasillf llaspiaipf hsfikslnyg eqddlegriq epllrseiaa aekevivvaa
      301 vaaeeeekkr kkpvlgedht imeavltvdf wvlfvsflcg vgtglavmnn mgqiglalgy
      361 tnvsifvsmt siwgffgril sgtlseyflk kagtprplwn aasqilmavg yilmalavpn
      421 slyigsmvvg vcygvrlait vptaselfgl kyygliynil vlnlplgsfl fsgllagfly
      481 daeatptpgg gntcvgahcy rlifivmala svigvgldlv layrtkeiya kihaskkskk
      541 sggsls
//
Feature
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Protein clusters for NP_179257.1

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the AT2G16660 gene (NM_127218.4).
  • RefSeq protein isoforms
    See the other reference sequence protein isoform for the AT2G16660 gene (NP_001325139.1).

More about the AT2G16660 gene

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