LOCUS NP_179257 546 aa linear PLN 20-OCT-2022
DEFINITION Major facilitator superfamily protein [Arabidopsis thaliana].
ACCESSION NP_179257
VERSION NP_179257.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_127218.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 546)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (residues 1 to 546)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 546)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 546)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEC06523.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..546
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
Protein 1..546
/product="Major facilitator superfamily protein"
/calculated_mol_wt=58846
Region 13..515
/region_name="MFS_Mch1p_like"
/note="Monocarboxylate transporter-homologous (Mch) 1
protein and similar transporters of the Major Facilitator
Superfamily of transporters; cd17354"
/db_xref="CDD:340912"
Site order(24..25,28..29,32,66,123..124,126..128,131,150,
153..154,157,337,340..341,344..346,349,374,378,432..433,
437,441,457,460..461,464..465,468)
/site_type="other"
/note="putative chemical substrate binding pocket
[chemical binding]"
/db_xref="CDD:340912"
CDS 1..546
/locus_tag="AT2G16660"
/gene_synonym="T24I21.7; T24I21_7"
/coded_by="NM_127218.4:299..1939"
/inference="Similar to RNA sequence,
EST:INSD:EH807762.1,INSD:EL227375.1,INSD:EH848891.1,
INSD:BP853257.1,INSD:EL125971.1,INSD:EL010402.1,
INSD:F20091.1,INSD:EL151984.1,INSD:EH807573.1,
INSD:DR380176.1,INSD:EL076267.1,INSD:EH866656.1,
INSD:EL221828.1,INSD:EL047239.1,INSD:EL264598.1,
INSD:EL217668.1,INSD:EG518987.1,INSD:EL180554.1,
INSD:AV545432.1,INSD:EL298172.1,INSD:AV829127.1,
INSD:ES201549.1,INSD:DR227507.1,INSD:EH838532.1,
INSD:EH922554.1,INSD:EL995101.1,INSD:EL268472.1,
INSD:AV823252.1,INSD:EL080557.1,INSD:BX839562.1,
INSD:EL083949.1,INSD:EL133150.1,INSD:BP839035.1,
INSD:EL289961.1,INSD:BP853256.1,INSD:EL069816.1,
INSD:EL104748.1,INSD:EH958099.1,INSD:BP589838.1,
INSD:EG518986.1,INSD:EL211414.1,INSD:EL129844.1,
INSD:DR227508.1,INSD:EL257629.1,INSD:EL053016.1,
INSD:BX839160.1,INSD:EL986882.1,INSD:EL337406.1,
INSD:EL151998.1,INSD:EL060179.1,INSD:AV808856.1,
INSD:ES113299.1,INSD:EL093935.1,INSD:EL340368.1,
INSD:DR227505.1,INSD:BX839261.1,INSD:EH951646.1,
INSD:EL232465.1,INSD:EL264328.1,INSD:AV804512.1,
INSD:AV555992.1,INSD:EH875659.1,INSD:AI998806.1,
INSD:BX835466.1,INSD:EL126465.1,INSD:EH868780.1,
INSD:BP816248.1,INSD:EL056431.1,INSD:EH880382.1,
INSD:ES059002.1,INSD:EL152427.1,INSD:ES146442.1,
INSD:EL132280.1,INSD:EH931750.1,INSD:AV527965.1,
INSD:EL160235.1,INSD:DR227506.1,INSD:EH982324.1,
INSD:EH843612.1,INSD:EL217538.1,INSD:ES151832.1,
INSD:EL077597.1,INSD:AV810471.1,INSD:EL280680.1,
INSD:EH818851.1,INSD:EL213769.1,INSD:EL113828.1,
INSD:ES087983.1,INSD:DR227504.1,INSD:ES018235.1,
INSD:BP788778.1,INSD:AV521232.1,INSD:EL133167.1,
INSD:EL186247.1,INSD:EL216593.1,INSD:EH986881.1,
INSD:F20092.1,INSD:EL144220.1,INSD:EL068869.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY070369.1,INSD:AY095988.1,INSD:BT000835.1,
INSD:BT000802.1,INSD:BX820049.1,INSD:BX820854.1,
INSD:BX819966.1,INSD:BX819745.1,INSD:BX820471.1"
/note="Major facilitator superfamily protein; INVOLVED IN:
response to karrikin; LOCATED IN: endomembrane system;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like
(InterPro:IPR010658), Major facilitator superfamily,
general substrate transporter (InterPro:IPR016196); BEST
Arabidopsis thaliana protein match is: Major facilitator
superfamily protein (TAIR:AT4G34950.1); Has 3381 Blast
hits to 3270 proteins in 872 species: Archae - 26;
Bacteria - 1620; Metazoa - 6; Fungi - 314; Plants - 598;
Viruses - 0; Other Eukaryotes - 817 (source: NCBI BLink)."
/db_xref="Araport:AT2G16660"
/db_xref="GeneID:816167"
/db_xref="TAIR:AT2G16660"
ORIGIN
1 mgfqrsisss salkwlgfvt avwvqsisgn nytfsnysga lkslmnlnql elnnlsvakd
61 vgkafgilag lasdrlptpv illigcfegl lgygvqwlvv srtiqpipyw qmciflcmgg
121 nsttwmntav lvtcirnfrr nrgpvsgilk gyvglstaif tdlctalfsn dpasflvlla
181 vvpfavclta vfflreippa ssaaeeneet ryftifniva vvvavylqsy diigiktgvf
241 svafasillf llaspiaipf hsfikslnyg eqddlegriq epllrseiaa aekevivvaa
301 vaaeeeekkr kkpvlgedht imeavltvdf wvlfvsflcg vgtglavmnn mgqiglalgy
361 tnvsifvsmt siwgffgril sgtlseyflk kagtprplwn aasqilmavg yilmalavpn
421 slyigsmvvg vcygvrlait vptaselfgl kyygliynil vlnlplgsfl fsgllagfly
481 daeatptpgg gntcvgahcy rlifivmala svigvgldlv layrtkeiya kihaskkskk
541 sggsls
//